PROTEIN: WampachL_2018_SRR5575366_bin.4_k141_2816_909
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Protein File & Metadata
Source:
WampachL_2018_SRR5575366_bin.4_k141_2816_909.pdb
Genome ID:
Protein ID:
WampachL_2018_SRR5575366_bin.4_k141_2816_909
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Protein Sequence
MSTRIFVDGS VYSPVDPYAT AMLVEDGFVR WVGSDSGARS IADESATITE LDGALLTPAF 60 ARALAPVTGK EAPEILDYLQ AYRAAGYHTH TLLAGMEDVP DLVSALSYYS AEHGTPDIRF 120 ILNATGIETD ELISAIKALR PLTEGERAVK GLQLVGIFVA PTEAPAAAQV AEDAALLLSI 180 DASTGFTTAA DAALTVRKNH PWLSIRLDAA ISTPQDPVTD EYLTKLAEAR INLGLSVCKP 240 EEDEAASDTV QALLAHAGGE ARESVASVAR RANAVGTSIA LGSDTQLYAP GTWSLIRELV 300 NDEHGISARS AFAALTRGVY RLAHEENPFT GQLTPDTPAY VAQWRVEALM VQAPDSRVAS 360 WSTDPRARIP LLPVLDEHVE LPVLESIYTE GK 392
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q0PC66-F1-model_v4 | 3 | 392 | 1 | 406 | 0.7131 |
0.7478 |
| AF-Q58110-F1-model_v4 | 1 | 392 | 2 | 378 | 0.7083 |
0.7409 |
| AF-O53619-F1-model_v4 | 1 | 392 | 13 | 396 | 0.708 |
0.7545 |
| AF-Q9HU91-F1-model_v4 | 1 | 392 | 1 | 397 | 0.7058 |
0.7301 |
| AF-D4AAV1-F1-model_v4 | 1 | 392 | 3 | 420 | 0.7047 |
0.7478 |
| AF-K0EWE7-F1-model_v4 | 2 | 392 | 1 | 416 | 0.7044 |
0.7671 |
| AF-K0F0R4-F1-model_v4 | 1 | 392 | 2 | 422 | 0.7024 |
0.7663 |
| AF-K0F1H2-F1-model_v4 | 1 | 392 | 1 | 527 | 0.7019 |
0.8176 |
| AF-Q22419-F1-model_v4 | 1 | 392 | 1 | 428 | 0.7004 |
0.7493 |
| AF-A0A0H3GQ39-F1-model_v4 | 1 | 392 | 3 | 431 | 0.6987 |
0.753 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A2R2W7C1-F1-model_v4 | CE9 | 2 | 392 | 1 | 380 | 0.6882 |
0.7198 |
| AF-A0A7G5XH04-F1-model_v4 | CE9 | 3 | 392 | 1 | 368 | 0.6822 |
0.7244 |
| AF-D9QRA4-F1-model_v4 | CE9 | 2 | 392 | 1 | 377 | 0.6801 |
0.7152 |
| AF-Q9AAZ9-F1-model_v4 | CE9 | 2 | 392 | 1 | 376 | 0.6796 |
0.7139 |
| AF-A0A5B8UQQ9-F1-model_v4 | CE9 | 2 | 392 | 1 | 368 | 0.6795 |
0.7215 |
| AF-A0A0H3C4P8-F1-model_v4 | CE9 | 2 | 392 | 1 | 376 | 0.6789 |
0.7132 |
| AF-A0A2Z4XYN4-F1-model_v4 | CE9 | 1 | 389 | 1 | 377 | 0.6785 |
0.7101 |
| AF-A0A1W1VW18-F1-model_v4 | CE9 | 1 | 392 | 1 | 384 | 0.6784 |
0.7093 |
| AF-A0A0N7I3F8-F1-model_v4 | CE9 | 2 | 392 | 1 | 375 | 0.678 |
0.7135 |
| AF-A0A7G6YFA4-F1-model_v4 | CE9 | 1 | 392 | 1 | 381 | 0.6777 |
0.7083 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A975SH49 | CE9 | 2 | 392 | 1 | 351 | 0.698 |
0.7572 |
| A0A7G5XH04 | CE9 | 3 | 392 | 1 | 368 | 0.6822 |
0.7244 |
| M1ZB45 | CE9 | 2 | 392 | 1 | 380 | 0.6817 |
0.716 |
| D9QRA4 | CE9 | 2 | 392 | 1 | 377 | 0.6801 |
0.7152 |
| A0A979G0H2 | CE9 | 2 | 391 | 1 | 368 | 0.6797 |
0.7202 |
| A0A5B8UH93 | CE9 | 1 | 392 | 1 | 366 | 0.6797 |
0.7248 |
| A0A1W1VW18 | CE9 | 1 | 392 | 1 | 384 | 0.6784 |
0.7093 |
| A0A2Z3V105 | CE9 | 1 | 392 | 16 | 414 | 0.6779 |
0.716 |
| L0K8T5 | CE9 | 1 | 392 | 1 | 382 | 0.6777 |
0.7118 |
| A0A1M6SKV0 | CE9 | 1 | 392 | 3 | 391 | 0.6768 |
0.7051 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 6nbo-assembly1.cif.gz_A | 1 | 392 | 1 | 382 | 0.714 |
0.7461 |
| 4gbd-assembly1.cif.gz_B | 1 | 392 | 1 | 406 | 0.7075 |
0.7576 |
| 7cdh-assembly1.cif.gz_X | 2 | 392 | 1 | 354 | 0.7074 |
0.7743 |
| 2puz-assembly1.cif.gz_B | 2 | 392 | 1 | 401 | 0.7041 |
0.7345 |
| 6ohc-assembly2.cif.gz_C | 1 | 392 | 1 | 420 | 0.7037 |
0.7507 |
| 4cqc-assembly1.cif.gz_B | 1 | 392 | 1 | 391 | 0.7033 |
0.7284 |
| 6ohc-assembly1.cif.gz_A | 1 | 392 | 2 | 423 | 0.7026 |
0.7515 |
| 6ohc-assembly2.cif.gz_D | 1 | 392 | 2 | 422 | 0.7018 |
0.7503 |
| 2paj-assembly1.cif.gz_A | 2 | 392 | 1 | 389 | 0.7002 |
0.7448 |
| 5xgw-assembly1.cif.gz_A | 1 | 392 | 1 | 360 | 0.7 |
0.7628 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q891Y7-F1-model_v4 | 2 | 392 | 1 | 400 | 0.7144 |
0.7631 |
| AF-Q67NQ5-F1-model_v4 | 1 | 392 | 1 | 407 | 0.7122 |
0.7646 |
| AF-Q2YIL5-F1-model_v4 | 1 | 392 | 4 | 404 | 0.7104 |
0.7367 |
| AF-Q58110-F1-model_v4 | 1 | 392 | 2 | 378 | 0.7083 |
0.7409 |
| AF-Q983I1-F1-model_v4 | 1 | 392 | 8 | 409 | 0.7077 |
0.7375 |
| AF-B8CX03-F1-model_v4 | 1 | 392 | 1 | 404 | 0.7071 |
0.7555 |
| AF-Q01W05-F1-model_v4 | 1 | 392 | 1 | 412 | 0.7069 |
0.7436 |
| AF-Q0I0K7-F1-model_v4 | 1 | 392 | 2 | 405 | 0.7069 |
0.7363 |
| AF-A1RQ59-F1-model_v4 | 1 | 392 | 2 | 405 | 0.7067 |
0.7361 |
| AF-Q02ES4-F1-model_v4 | 2 | 392 | 1 | 397 | 0.7063 |
0.7323 |