PROTEIN: WampachL_2018_SRR5575366_bin.4_k141_2699_149
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Protein File & Metadata
Source:
WampachL_2018_SRR5575366_bin.4_k141_2699_149.pdb
Genome ID:
Protein ID:
WampachL_2018_SRR5575366_bin.4_k141_2699_149
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Protein Sequence
MSQTSQVYAH LNEPAEKPEA SRFSEAVSRS SDYVRHQTSQ IRMPEFIMAF LLLFGDAVPG 60 LGLPFNQVVI LVLAAYGLTR KPTFDVSHFS GLRAIMFIAM GYLAIVSFYG VHSEDASDWT 120 RRLLRLMAAT VLIWAIAAGR LHIRSIVLGY STAIIFNAVA YFVGFAPVTG YYGYLTGWLG 180 DKNFSGLVYC LFGLLILSFA RNKIEVILVI VVFSALLWAT GSRTSIAAYV AGLIWIVIAN 240 RMKTFGRITL GVALYWLIDI LTSDYSQSGV FADRTGTDAL RSLIDQASEI KVQASGFFGQ 300 GLGEAYVYLA HTGSKTWFFH NSYWSALVEG GWPWMILVVA ITLLFIVNVF SGKKTLPTKF 360 YVVQGAGVAI MICASRLGEV FYTWPWAIAC GFALRVLLLE REQRLGTGHD EASIEGFDER 420 IEIREAEEKS QHAAPMWKEE NV 442
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Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A5P3FVF2-F1-model_v4 | 39 | 431 | 14 | 399 | 0.6283 |
0.7202 |
| AF-Q9I1M9-F1-model_v4 | 42 | 407 | 45 | 459 | 0.6195 |
0.7815 |
| AF-X8F0V5-F1-model_v4 | 40 | 416 | 43 | 469 | 0.6162 |
0.7566 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A2S058-F1-model_v4 | GH39 | 39 | 405 | 9 | 402 | 0.6022 |
0.7198 |
| AF-A0A517MXC4-F1-model_v4 | GT26 | 39 | 407 | 23 | 451 | 0.5423 |
0.8097 |
| AF-B8IGI7-F1-model_v4 | GH16_7 | 39 | 442 | 20 | 512 | 0.4969 |
0.7114 |
| AF-A0A7Z3BHU7-F1-model_v4 | GH39 | 41 | 428 | 24 | 424 | 0.4886 |
0.7306 |
| AF-M4X4V7-F1-model_v4 | GH39 | 39 | 429 | 22 | 426 | 0.4876 |
0.7251 |
| AF-A0A6G6J4Y8-F1-model_v4 | GH39 | 41 | 428 | 24 | 424 | 0.4873 |
0.7295 |
Structural Homologs -
CAZyme-ID50
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q6F7F9-F1-model_v4 | 39 | 405 | 10 | 407 | 0.5774 |
0.7694 |