PROTEIN: VatanenT_2016_SRR4408211_bin.5_k119_18241_26
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Protein File & Metadata
Source:
VatanenT_2016_SRR4408211_bin.5_k119_18241_26.pdb
Genome ID:
Protein ID:
VatanenT_2016_SRR4408211_bin.5_k119_18241_26
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Protein Sequence
MIKIERTSVM NFENAIRGAR NPMNSWHRQD SYYDEKGNFI FGENDLNLAK RLAHAGSDHR 60 KFMRQIFVSV DFTAPLYWWK EFDTYKVATV ANSTSTMHKI ASKPFSLDDF SHDHMNEVAL 120 HSLSQVIETL EHLRQDYLKT KDKTTWYSMI QLLPSSYNQM RTVTMNYESL VNIYHARKKH 180 KLNEWHEVCD WIKSLPYAND LVTFEND 207
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9PJ85-F1-model_v4 | 2 | 206 | 1 | 202 | 0.7907 |
0.8339 |
| AF-O26061-F1-model_v4 | 2 | 205 | 1 | 205 | 0.7807 |
0.8198 |
| AF-P9WG57-F1-model_v4 | 1 | 207 | 6 | 232 | 0.6861 |
0.7721 |
| AF-Q9CBW3-F1-model_v4 | 1 | 207 | 6 | 236 | 0.6769 |
0.7674 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - CAZyme-ID50
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 3ah5-assembly1.cif.gz_D | 2 | 205 | 1 | 205 | 0.7907 |
0.8271 |
| 3n3y-assembly1.cif.gz_C | 1 | 205 | 1 | 205 | 0.7878 |
0.8223 |
| 3n3y-assembly1.cif.gz_D | 2 | 206 | 1 | 207 | 0.7876 |
0.8227 |
| 3n0c-assembly1.cif.gz_A | 1 | 207 | 7 | 216 | 0.7473 |
0.7859 |
| 5iot-assembly1.cif.gz_B | 1 | 207 | 7 | 217 | 0.7461 |
0.7863 |
| 5ios-assembly1.cif.gz_D | 1 | 207 | 6 | 216 | 0.7449 |
0.7847 |
| 4kat-assembly1.cif.gz_A | 1 | 207 | 8 | 218 | 0.7446 |
0.7865 |
| 3g4a-assembly1.cif.gz_A | 1 | 207 | 8 | 218 | 0.744 |
0.786 |
| 1o27-assembly1.cif.gz_B | 1 | 207 | 6 | 216 | 0.74 |
0.7789 |
| 5ios-assembly1.cif.gz_A | 1 | 207 | 7 | 214 | 0.7386 |
0.7737 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q7MQK8-F1-model_v4 | 2 | 205 | 1 | 201 | 0.7931 |
0.8351 |
| AF-Q5HXD2-F1-model_v4 | 2 | 206 | 1 | 202 | 0.7927 |
0.8357 |
| AF-Q9PJ85-F1-model_v4 | 2 | 206 | 1 | 202 | 0.7907 |
0.8339 |
| AF-Q9ZJ93-F1-model_v4 | 2 | 205 | 1 | 205 | 0.782 |
0.821 |
| AF-O26061-F1-model_v4 | 2 | 205 | 1 | 205 | 0.7807 |
0.8198 |
| AF-B9KBK3-F1-model_v4 | 1 | 207 | 6 | 216 | 0.751 |
0.7894 |
| AF-A8F7Q7-F1-model_v4 | 1 | 207 | 6 | 220 | 0.7435 |
0.7898 |
| AF-A5IJX2-F1-model_v4 | 1 | 207 | 6 | 219 | 0.7321 |
0.7797 |
| AF-B1L944-F1-model_v4 | 1 | 207 | 6 | 219 | 0.7318 |
0.7795 |
| AF-Q9WYT0-F1-model_v4 | 1 | 207 | 6 | 219 | 0.7305 |
0.7782 |