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PROTEIN: VatanenT_2016_SRR4305271_bin.2_k119_5535_14

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Protein File & Metadata
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Source:
VatanenT_2016_SRR4305271_bin.2_k119_5535_14.pdb
Genome ID:
VatanenT_2016_SRR4305271_bin.2
Protein ID:
VatanenT_2016_SRR4305271_bin.2_k119_5535_14

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Protein Sequence 
MKIEHSVFYE   FYRNAGFKVY   TSHSGEWCEL   QPRMLISIPY   HRLINPTKEE   LDHLLKVSGA 60
WGVRFPTDIS   NHGFISKVEI   CEDFGYDLQF   LEHKFRNRVV   KGEQYCEIRP   VSIPELKKEG 120
YRLNLCTLKR   QNRNDPKANM   EYWHRICDGL   AKTNGVNILG   AYFKDQLAAY   VVILESSSMT 180
EMIIQNSDSE   LLKYCPNNLL   TYYVTWYYLT   KRSNPIPICY   GLGSLEETSS   LDRYKKGMGY 240
VMKPIKQRLY   FRRGFRLFLR   PWLLYLGDLV   NKHIVKGKSY   TLDKGCAILK   RYLEQQ 296
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-K0F7Q2-F1-model_v4 5 259 22 286 0.6418 0.7489
AF-Q8DQR1-F1-model_v4 1 278 9 406 0.6411 0.7998
AF-K0EML1-F1-model_v4 1 253 17 314 0.6391 0.783
AF-Q8CZ30-F1-model_v4 1 270 10 294 0.6376 0.717
AF-Q2FVZ4-F1-model_v4 1 276 6 417 0.6273 0.7998
AF-O25065-F1-model_v4 2 257 12 290 0.6171 0.7249
AF-Q8DQR0-F1-model_v4 1 282 7 410 0.6088 0.7529
AF-Q2FVL5-F1-model_v4 1 270 7 416 0.5996 0.7758
AF-A0A1D8PM07-F1-model_v4 9 294 1 445 0.5982 0.7534
AF-Q2FYR1-F1-model_v4 1 274 7 419 0.5969 0.7643
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A1Y0CB11-F1-model_v4 GT4 1 287 417 765 0.5211 0.7795
AF-A0A6H1RBS1-F1-model_v4 GT1 1 288 346 680 0.5198 0.7482
A0R4V1 GT2 1 289 319 695 0.5185 0.7503
AF-Q5KSB3-F1-model_v4 GT4 1 278 403 742 0.4996 0.761
AF-Q2IPR1-F1-model_v4 GT4 1 285 346 686 0.4958 0.724
A0A0F6WPF6 GT4 1 279 402 739 0.4951 0.7513
AF-A0A0F6WPF6-F1-model_v4 GT4 1 279 402 739 0.4951 0.7513
AF-A0A6M4Q982-F1-model_v4 GT4 1 277 402 740 0.4946 0.7556
AF-A0A0U4WRS8-F1-model_v4 GT4 1 278 402 741 0.4943 0.7527
AF-A0A0B6TIX1-F1-model_v4 GT4 1 296 390 747 0.4941 0.7168
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A1Y0CB11 GT4 1 287 417 765 0.5211 0.7795
A0A6H1RBS1 GT1 1 288 346 680 0.5198 0.7482
A0R4V1 GT2 1 289 319 695 0.5185 0.7503
A0A0F6WPF6 GT4 1 279 402 739 0.4951 0.7513
A0A5K7YHP0 GT4 1 294 363 710 0.4936 0.7073
B8JF70 GT4 1 284 363 690 0.4851 0.711
A0A4U1HM25 GT4 1 272 367 698 0.4751 0.7245
BDG08718.1 GT4 1 255 412 727 0.4723 0.7781
WIM71735.1 GT4 1 279 402 765 0.4387 0.6777
A0A2V1AHZ9 GH3 1 276 609 995 0.3886 0.6406
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
7z6a-assembly1.cif.gz_A 1 289 10 332 0.6543 0.7297
1xe4-assembly1.cif.gz_A 1 293 10 335 0.6536 0.7232
1xix-assembly1.cif.gz_A 1 293 10 335 0.6525 0.7221
1xf8-assembly1.cif.gz_A 1 293 10 335 0.6512 0.7208
6lv0-assembly2.cif.gz_B 2 287 6 316 0.642 0.7115
4v36-assembly2.cif.gz_B 1 288 14 312 0.6319 0.6923
5vrv-assembly2.cif.gz_D 2 285 8 310 0.6284 0.6971
5vrv-assembly1.cif.gz_B 2 285 8 311 0.6284 0.6977
5vrv-assembly3.cif.gz_E 2 285 8 309 0.6277 0.697
4v35-assembly1.cif.gz_A 2 288 14 321 0.6256 0.6925
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q9EY50-F1-model_v4 1 293 11 336 0.6537 0.724
AF-Q4L8C6-F1-model_v4 1 276 6 415 0.6332 0.8058
AF-Q49ZI0-F1-model_v4 1 276 6 412 0.6319 0.8014
AF-Q5HLY6-F1-model_v4 1 276 6 412 0.6313 0.8015
AF-Q2FEM9-F1-model_v4 1 276 6 417 0.6292 0.8022
AF-Q8NVA9-F1-model_v4 1 276 6 417 0.6281 0.8009
AF-Q8CNE9-F1-model_v4 1 276 6 412 0.628 0.7974
AF-Q5HDU6-F1-model_v4 1 276 6 417 0.628 0.8008
AF-P0C1Q0-F1-model_v4 1 276 6 417 0.6279 0.8004
AF-Q6G760-F1-model_v4 1 276 6 417 0.6277 0.8004
Download Full SwissProt Results