PROTEIN: VatanenT_2016_SRR4305271_bin.2_k119_16280_9
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Protein File & Metadata
Source:
VatanenT_2016_SRR4305271_bin.2_k119_16280_9.pdb
Genome ID:
Protein ID:
VatanenT_2016_SRR4305271_bin.2_k119_16280_9
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Protein Sequence
MKIKNEKNET KVKNQITIDY ENKRLSVFYF LPLLLIAGFV PLIVYAKYVD LTGTTQALYW 60 TGQQQYLDFF SYWKSRWVIV LTAIALIFYI ILYKKKKLPF KNLKQYYIPL GIYAVFVIIS 120 TIFAIDTQTA LWGFVDMYQG MFVLLSYVLI TFLTINFVNN ERDVNLFVNA FLFLMIVEGI 180 IGVGQYFGFD LFQTKLGKSL IIPSNLVVED LSFSFGSKTI YGTLFNTNFV GSFATLMLPL 240 SIGIFLSART RNKRIVSGIA IILMIFTWIG CNSRAGYLGV IISLIFALWL FRKLFIKHWK 300 ISASLIAVLI AVFIGLNVMS GGAILARIKT LNVNEQLKNV KAANENAVRF EDISLGKNTF 360 SIKTNRETLN FRIDENKLYF LDENNTEMEI TSKGSQITIN DPRYAGYSIS IKDNYPGVSV 420 VAYGKTINFY ITSDAIKIVG SGGRLTEPKS SPLFEPLRGL ETMGSNRGYE WAGSIPMLKD 480 YAIIGSGPDN FPMAFNQDDF VAKLNLIDFD ANIVIDKPHN MYLQMAINTG TVSMIAFVAV 540 CVIYVAASLS LFSKSNFAKA EEIIGGALMI SIIGYLFAGL FNDSVTSVAP LFWIVLGISI 600 GINTRLKKIL YNSET 615
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9I1M9-F1-model_v4 | 25 | 611 | 40 | 457 | 0.6482 |
0.8356 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A9Q9IL13 | GT4 | 14 | 615 | 8 | 507 | 0.5271 |
0.7712 |
| AF-B8DZR6-F1-model_v4 | GT9 | 11 | 615 | 19 | 477 | 0.5193 |
0.7676 |
| AF-B5YD26-F1-model_v4 | GT9 | 11 | 615 | 22 | 476 | 0.5159 |
0.7702 |
| AF-A0A517MXC4-F1-model_v4 | GT26 | 24 | 615 | 20 | 454 | 0.5091 |
0.772 |
| AF-D5MJ04-F1-model_v4 | GT9 | 18 | 615 | 18 | 563 | 0.505 |
0.6349 |
| WBY01952.1 | GT9 | 17 | 615 | 7 | 445 | 0.4834 |
0.7342 |
| AF-A0A7S8IC57-F1-model_v4 | GH39 | 19 | 615 | 550 | 1045 | 0.4572 |
0.7044 |
| AF-B8G860-F1-model_v4 | GH39 | 20 | 614 | 552 | 1023 | 0.4537 |
0.7249 |
| AF-A0A160T1R3-F1-model_v4 | GH39 | 1 | 610 | 7 | 1041 | 0.4504 |
0.5744 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A9Q9IL13 | GT4 | 14 | 615 | 8 | 507 | 0.5271 |
0.7712 |
| B5YD26 | GT9 | 11 | 615 | 22 | 476 | 0.5159 |
0.7702 |
| A0A517MXC4 | GT26 | 24 | 615 | 20 | 454 | 0.5091 |
0.772 |
| UII34295.1 | GT4 | 18 | 615 | 8 | 424 | 0.5065 |
0.8184 |
| D5MJ04 | GT9 | 18 | 615 | 18 | 563 | 0.505 |
0.6349 |
| R4KL74 | GT4 | 17 | 615 | 2 | 585 | 0.4918 |
0.606 |
| A0A2P1NHY6 | GT4 | 10 | 612 | 1 | 446 | 0.4886 |
0.7585 |
| WBY01952.1 | GT9 | 17 | 615 | 7 | 445 | 0.4834 |
0.7342 |
| B8IGI7 | GH16_7 | 25 | 615 | 18 | 462 | 0.479 |
0.7471 |
| I0HYS1 | GH39 | 19 | 608 | 409 | 852 | 0.476 |
0.7526 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-O32270-F1-model_v4 | 21 | 615 | 57 | 486 | 0.6322 |
0.8025 |