PROTEIN: ShaoY_2019_ERR3406288_bin.2_k141_12297_78
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Protein File & Metadata
Source:
ShaoY_2019_ERR3406288_bin.2_k141_12297_78.pdb
Genome ID:
Protein ID:
ShaoY_2019_ERR3406288_bin.2_k141_12297_78
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Protein Sequence
MSDDYKNKKP CLCDCGKFCY NNKDCCYLKS KDINIVQIND PEFFQGITSY NNLHLTAKEP 60 DINTVGYKVE SSSLQHPNDT LIIDESGVYS IYISLKYSFK FNENAKEGDI FRVNFIINGN 120 KEDIFAISNT ITIPAIIDGE SEEIVNTIQG KKLQIIEEDL PYKINIILDE FEFDKVILNQ 180 ILITDLVLIV EKVI 194
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-B8JLI7-F1-model_v4 | 16 | 194 | 40 | 207 | 0.6167 |
0.752 |
| AF-P41273-F1-model_v4 | 24 | 194 | 80 | 241 | 0.5459 |
0.7472 |
| AF-Q8R2Z0-F1-model_v4 | 12 | 194 | 146 | 307 | 0.5226 |
0.7693 |
| AF-Q5T7M4-F1-model_v4 | 15 | 194 | 139 | 301 | 0.5223 |
0.7587 |
| AF-D3ZQD2-F1-model_v4 | 12 | 194 | 146 | 307 | 0.5219 |
0.7675 |
| AF-D4AB34-F1-model_v4 | 11 | 194 | 133 | 340 | 0.5058 |
0.6888 |
| AF-Q6PGN1-F1-model_v4 | 11 | 194 | 138 | 339 | 0.5053 |
0.688 |
| AF-A0A2R8QBY7-F1-model_v4 | 20 | 194 | 110 | 242 | 0.4978 |
0.8006 |
| AF-Q4G0M1-F1-model_v4 | 15 | 194 | 151 | 353 | 0.4953 |
0.6966 |
| AF-F1Q7G0-F1-model_v4 | 28 | 194 | 89 | 231 | 0.4844 |
0.7118 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - CAZyme-ID50
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 8d02-assembly1.cif.gz_A | 29 | 194 | 1 | 148 | 0.7018 |
0.8194 |
| 6cu0-assembly2.cif.gz_C | 30 | 194 | 1 | 146 | 0.6717 |
0.7974 |
| 7r1m-assembly1.cif.gz_C | 29 | 194 | 1 | 148 | 0.671 |
0.7951 |
| 6cu0-assembly1.cif.gz_B | 34 | 194 | 1 | 146 | 0.6674 |
0.792 |
| 7r5i-assembly1.cif.gz_C | 29 | 194 | 1 | 144 | 0.6664 |
0.8001 |
| 6a3v-assembly8.cif.gz_O | 30 | 194 | 1 | 145 | 0.664 |
0.7934 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-O43508-F1-model_v4 | 14 | 194 | 98 | 249 | 0.5509 |
0.7929 |
| AF-P41273-F1-model_v4 | 24 | 194 | 80 | 241 | 0.5459 |
0.7472 |
| AF-Q2KIT0-F1-model_v4 | 13 | 192 | 57 | 191 | 0.5453 |
0.7795 |
| AF-Q06577-F1-model_v4 | 13 | 194 | 78 | 213 | 0.532 |
0.7936 |
| AF-Q8R2Z0-F1-model_v4 | 12 | 194 | 146 | 307 | 0.5226 |
0.7693 |
| AF-Q5T7M4-F1-model_v4 | 15 | 194 | 139 | 301 | 0.5223 |
0.7587 |
| AF-A1A5X5-F1-model_v4 | 13 | 194 | 133 | 317 | 0.5177 |
0.6954 |
| AF-A4IH36-F1-model_v4 | 14 | 194 | 160 | 323 | 0.5139 |
0.7603 |
| AF-D4AB34-F1-model_v4 | 11 | 194 | 133 | 340 | 0.5058 |
0.6888 |
| AF-Q6PGN1-F1-model_v4 | 11 | 194 | 138 | 339 | 0.5053 |
0.688 |