PROTEIN: ShaoY_2019_ERR3406275_bin.12_k141_12321_4
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Protein File & Metadata
Source:
ShaoY_2019_ERR3406275_bin.12_k141_12321_4.pdb
Genome ID:
Protein ID:
ShaoY_2019_ERR3406275_bin.12_k141_12321_4
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Protein Sequence
MTSVKTAMAT KHAKAHARFD GSFPVSEQRI IDWFPAVALF IFVAYHGLRD TIASMVGMYS 60 LVVYALTCAA WFLLAAYWLR EGMKLTKRFI LLPTAVFAVF AFYMAVRHID VYIFEEYALP 120 QAINPMGGMV AFVFLASQND ASRADAALKL ATVIMTVFLQ SSLGSVMQAT TVAGYDMGLG 180 FDALFFALLS LHFIVDCRGV RSLPMTAVWA LCTVSNVALI LSYGSRGPLL GLIAFAALRF 240 LVYIFGSKGP ILRKMLALLL VIGFVLTLVT FLNGLVSMLN HQLNSMGITS RTLEKFLYAD 300 IASDSGRSTI WNTLIPRITA LGNGPFSDQT YLGPGNYCHN FFLEVFYDFG IPFGIVILCV 360 LAWFLVLSFW SCNVSPWFPI FLTLLAFCIG RLGLSGTFWT ETYFWGLLAV MGLCTADLKK 420 NAAAASKEAA R 431
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q2G1J9-F1-model_v4 | 31 | 428 | 1 | 388 | 0.7369 |
0.7955 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A6P1G0P3-F1-model_v4 | GT0 | 26 | 431 | 7 | 443 | 0.5539 |
0.7529 |
Structural Homologs - CAZyme-ID50
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.