PROTEIN: ShaoY_2019_ERR3406052_bin.4_k141_9609_233
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Protein File & Metadata
Source:
ShaoY_2019_ERR3406052_bin.4_k141_9609_233.pdb
Genome ID:
Protein ID:
ShaoY_2019_ERR3406052_bin.4_k141_9609_233
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Protein Sequence
MHVFNSRADF DAQMKSVKKW MRTGQALDGV SELQHDVAYS IGDSLVYWWV NAHEAATADL 60 VGHRRYHAVL APLDGDLTVE VASKADLTCT RAYSDIDDRE RFEGAGETVT IPAGGVAVIE 120 IDEAYRVIAE ASDPRVVVLH VTVEGYSFPN K 151
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P0AC73-F1-model_v4 | 1 | 145 | 1 | 143 | 0.9017 |
0.9636 |
| AF-Q8CYF8-F1-model_v4 | 1 | 144 | 1 | 150 | 0.8099 |
0.8763 |
| AF-Q8ZLQ9-F1-model_v4 | 1 | 147 | 1 | 154 | 0.8026 |
0.867 |
| AF-O25673-F1-model_v4 | 1 | 150 | 2 | 178 | 0.7947 |
0.8904 |
| AF-Q8ZL82-F1-model_v4 | 1 | 146 | 1 | 154 | 0.7901 |
0.8576 |
| AF-P37673-F1-model_v4 | 1 | 147 | 1 | 155 | 0.7862 |
0.8514 |
| AF-P44583-F1-model_v4 | 1 | 146 | 1 | 155 | 0.7749 |
0.8464 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - CAZyme-ID50
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 4tsd-assembly1.cif.gz_A | 1 | 150 | 1 | 177 | 0.7869 |
0.8847 |
| 1s4c-assembly1.cif.gz_A | 1 | 146 | 1 | 150 | 0.7791 |
0.8395 |
| 1s4c-assembly2.cif.gz_C | 1 | 146 | 1 | 147 | 0.7721 |
0.8233 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P0AC74-F1-model_v4 | 1 | 145 | 1 | 143 | 0.9022 |
0.964 |
| AF-P0AC73-F1-model_v4 | 1 | 145 | 1 | 143 | 0.9017 |
0.9636 |
| AF-P37673-F1-model_v4 | 1 | 147 | 1 | 155 | 0.7862 |
0.8514 |
| AF-P44583-F1-model_v4 | 1 | 146 | 1 | 155 | 0.7749 |
0.8464 |