PROTEIN: ShaoY_2019_ERR3405993_bin.7_k141_14261_9
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Protein File & Metadata
Source:
ShaoY_2019_ERR3405993_bin.7_k141_14261_9.pdb
Genome ID:
Protein ID:
ShaoY_2019_ERR3405993_bin.7_k141_14261_9
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Protein Sequence
MKAFHYLIPL MLALCCCACH PAPQASAPPS DPETPVESAA WQSQTEPVTL TLSTGSPQQG 60 NSHPWGSDGI SQAITQLTGV TLACQPQPQL EVLLSSGELG DLVYAYYDEI NLRKLENADV 120 SLALDELSAQ YCPDFWAGLD PLEKLNNQCA DGHVYTLRRG YLSQAAYEDD RIPVPVPRVL 180 SLRSDWLEAL GRTMPASLEE LEEILYLAKD RAQELGIVQP LRLMHAAASP LAEWMGAPRE 240 PRWDAFAGKV RTPFTNEAWL DYLRLMGKWY RDGVLVLPDA ALPWRLSQLY DNIEYNTGGE 300 QVIMPGYNAL LDYIQKTTAG AFATGADYTL IGDMPVMLRP LYGLRAGTPE EPFAHALIPA 360 PLTYQGEVHL QALDTAIGAN GPSDQVGGLF IARTCAHPDR AILFMQFLKS PEGARLTSWG 420 LEGEHYTLNE EGLPVYLPEY RDPEKPSGGN PRTQAGIGVW NFLDRGEVEG LMTASVMASS 480 DSADQAALNA MRLKAGLAYK ESLRENRCPA LHFALPDAWS SQTAYNQYLA MEDLFFTAIQ 540 EMVKSPSDEA LTGQWRQLQQ KLSAQGLDAL ESEMTTRFLE ALDRYQAAGY ATQITPPKG 599
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A133CZN8-F1-model_v4 | 44 | 583 | 33 | 502 | 0.677 |
0.797 |
| AF-A0A133CSA1-F1-model_v4 | 43 | 573 | 23 | 427 | 0.5748 |
0.7159 |
| AF-K0F002-F1-model_v4 | 47 | 573 | 45 | 439 | 0.5337 |
0.687 |
| AF-K0F8J3-F1-model_v4 | 48 | 574 | 29 | 435 | 0.5313 |
0.6659 |
| AF-Q8DRJ6-F1-model_v4 | 48 | 595 | 61 | 514 | 0.5041 |
0.6204 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A0M1Q963 | GH43_11 | 43 | 587 | 41 | 506 | 0.627 |
0.7481 |
| A0A242CSU4 | CBM35 | 15 | 590 | 87 | 998 | 0.4179 |
0.545 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A0M1Q963 | GH43_11 | 43 | 587 | 41 | 506 | 0.627 |
0.7481 |
| A0A242CSU4 | CBM35 | 15 | 590 | 87 | 998 | 0.4179 |
0.545 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5g5y-assembly1.cif.gz_A | 46 | 588 | 1 | 494 | 0.7374 |
0.8208 |
| 6fth-assembly1.cif.gz_A | 46 | 586 | 1 | 496 | 0.6935 |
0.7738 |
| 3omb-assembly1.cif.gz_A | 46 | 592 | 5 | 503 | 0.6888 |
0.7694 |
| 5xs8-assembly1.cif.gz_A | 48 | 582 | 1 | 474 | 0.6535 |
0.7461 |
| 4tqu-assembly1.cif.gz_Q | 41 | 595 | 2 | 492 | 0.6473 |
0.7294 |
| 5g62-assembly2.cif.gz_B | 49 | 589 | 1 | 491 | 0.6444 |
0.7259 |
| 5h6u-assembly1.cif.gz_A | 42 | 595 | 1 | 487 | 0.6431 |
0.7264 |
| 6jhx-assembly2.cif.gz_B | 41 | 596 | 2 | 483 | 0.6422 |
0.7293 |
| 3vlw-assembly2.cif.gz_B | 41 | 592 | 1 | 489 | 0.6398 |
0.722 |
| 5suo-assembly1.cif.gz_A | 48 | 587 | 1 | 451 | 0.6257 |
0.7294 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A0H2URD6-F1-model_v4 | 41 | 589 | 38 | 538 | 0.7035 |
0.8059 |
| AF-Q795R2-F1-model_v4 | 43 | 583 | 36 | 498 | 0.6815 |
0.8096 |
| AF-P37966-F1-model_v4 | 44 | 583 | 31 | 502 | 0.6683 |
0.7847 |
| AF-O31518-F1-model_v4 | 38 | 573 | 25 | 427 | 0.5897 |
0.7367 |
| AF-Q8FVS7-F1-model_v4 | 47 | 573 | 23 | 411 | 0.5532 |
0.6999 |
| AF-Q578M8-F1-model_v4 | 47 | 573 | 23 | 411 | 0.5522 |
0.6984 |
| AF-Q2YKZ9-F1-model_v4 | 47 | 573 | 23 | 411 | 0.5508 |
0.6967 |
| AF-A0A0H2UMY0-F1-model_v4 | 47 | 593 | 38 | 491 | 0.5146 |
0.6206 |