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PROTEIN: ShaoY_2019_ERR3405990_bin.18_k141_5398_3

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Protein File & Metadata
Download PDB File
Source:
ShaoY_2019_ERR3405990_bin.18_k141_5398_3.pdb
Genome ID:
ShaoY_2019_ERR3405990_bin.18
Protein ID:
ShaoY_2019_ERR3405990_bin.18_k141_5398_3

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Detailed structural information will appear here after analysis...

Protein Sequence 
MKNVKKVTAG   LLASLMLMSS   AACGGTATPG   ASTPADASTP   AAKTDSTKTL   RIYAWNTEFQ 60
DRFNAYFKDA   GKLPSDINVE   WVITPSDDNA   YQNKLDADLK   AQSSTPDKID   LFLIEADYAL 120
KYVDSEYTLD   VKADVGLTDE   DLKDQYKYTQ   EIATDANGKL   KGVTWQATPG   LFAYRRSIAK 180
DVLGTDDPAK   VQEALSDWDK   FDKVAEQASA   KGYKMLSGYD   DAYRTFANNI   SAPWVDENDT 240
IRIDPILMKW   VDQTKAYTDK   NYNNKTSLWA   PEWSADQGPE   GKVFGFFYST   WGINFTLLGN 300
ALAVPVKEGG   KTEVGNGIYG   DYAVTQGPAN   YYWGGTWICA   AKESDNIDLV   RDIMKTLTCD 360
PVTMKKITED   TEDFTNNQTA   MGELANSDYK   SAFLGGQNHI   ALFAQAAPGI   DMSNIGKYDQ 420
GMTEEFQTAF   KDYFDGNVSK   DDALNNFYTA   IIEKYPNLKR   PA 462
Protein Structure Viewer

Confidence Score (pLDDT)

Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-K0EWS5-F1-model_v4 44 462 24 457 0.7247 0.808
AF-K0F002-F1-model_v4 45 458 45 439 0.7184 0.8294
AF-K0F2E6-F1-model_v4 43 459 39 436 0.7133 0.8211
AF-P71619-F1-model_v4 44 459 33 428 0.7132 0.82
AF-P76042-F1-model_v4 45 458 26 430 0.7115 0.7976
AF-K0F8J3-F1-model_v4 14 459 19 436 0.7074 0.7771
AF-K0F1Y0-F1-model_v4 46 457 50 433 0.7069 0.833
AF-A0A133CPC5-F1-model_v4 45 458 33 423 0.7037 0.8078
AF-Q8DNN7-F1-model_v4 25 459 17 434 0.7033 0.7725
AF-K0EWS9-F1-model_v4 45 459 50 463 0.7031 0.7978
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
AF-K8EJG7-F1-model_v4 CBM50 , CE4 42 459 29 415 0.6694 0.7719
AF-K8E205-F1-model_v4 GH32 42 438 29 344 0.6246 0.7883
A0A9Q8PNJ5 GH4 2 458 261 866 0.5713 0.757
AF-A0A1Q2TKJ3-F1-model_v4 GH49 1 459 26 797 0.5483 0.7042
UJP10085.1 GH154 18 438 676 1168 0.4012 0.6599
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
K8EJG7 CBM50 , CE4 42 459 29 415 0.6694 0.7719
K8E205 GH32 42 438 29 344 0.6246 0.7883
A0A0M1Q963 GH43_11 45 460 39 495 0.6029 0.7119
A0A9Q8PNJ5 GH4 2 458 261 866 0.5713 0.757
A0A1Q2TKJ3 GH49 1 459 26 797 0.5483 0.7042
A0A7U1BNH7 GH10 43 462 26 735 0.5432 0.7374
UJP10085.1 GH154 18 438 676 1168 0.4012 0.6599
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
5ixp-assembly1.cif.gz_A 47 456 1 393 0.8228 0.9019
3uor-assembly2.cif.gz_B 48 459 1 388 0.7707 0.8599
6x84-assembly2.cif.gz_B 45 459 1 411 0.7515 0.8143
4rk2-assembly1.cif.gz_A 47 456 1 393 0.7503 0.8273
7c6z-assembly1.cif.gz_A 48 459 1 415 0.7457 0.8082
6dtr-assembly1.cif.gz_A 47 459 1 393 0.7438 0.8204
7c6x-assembly7.cif.gz_G 49 459 1 414 0.7419 0.8068
4mfi-assembly1.cif.gz_A 44 459 3 398 0.7415 0.8214
7c71-assembly2.cif.gz_B 48 459 1 415 0.7414 0.8039
7bvt-assembly1.cif.gz_A 45 458 1 391 0.7375 0.8153
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-P29822-F1-model_v4 44 456 25 422 0.7641 0.8588
AF-P94528-F1-model_v4 32 457 10 433 0.7558 0.8104
AF-Q9KEE7-F1-model_v4 10 459 27 445 0.7316 0.8074
AF-P76042-F1-model_v4 45 458 26 430 0.7115 0.7976
AF-Q8FVS7-F1-model_v4 43 459 21 411 0.7063 0.8017
AF-Q578M8-F1-model_v4 43 459 21 411 0.7056 0.801
AF-Q2YKZ9-F1-model_v4 43 459 21 411 0.7037 0.799
AF-O31518-F1-model_v4 47 458 33 427 0.7003 0.8011
AF-Q00749-F1-model_v4 31 461 6 420 0.6987 0.7577
AF-P9WGU8-F1-model_v4 39 459 24 465 0.6968 0.7838
Download Full SwissProt Results