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PROTEIN: ShaoY_2019_ERR3405869_bin.2_k141_6517_14

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Protein File & Metadata
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Source:
ShaoY_2019_ERR3405869_bin.2_k141_6517_14.pdb
Genome ID:
ShaoY_2019_ERR3405869_bin.2
Protein ID:
ShaoY_2019_ERR3405869_bin.2_k141_6517_14

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Detailed structural information will appear here after analysis...

Protein Sequence 
MFKFSSKKIV   GTLALASAVL   ALGACGSKKD   ESTAEKKVDL   PSIEDRYKPD   ENTPAWKLDT 60
KKEATKLTWY   VNADWWNTEF   GKDMVTKKVK   EDLNVDIKFI   TGDDTKLNTY   FAGGDMPDIV 120
TIFDSNSQVA   RKANSWALPL   QDLAKKYDPY   FNKVARQETL   NWYKLSDGKS   YGYPDYSNTQ 180
QDFDSGDIFA   RDAFIIRKDV   YEAIGKPDFT   TPEGFVAGMK   KIKAQFPDLI   PFGFNDFAKD 240
GSSNGSMDSV   VQDMLGVPYT   KDGKYYDRNL   DSDYIKWVKA   FRQVHQDGNI   SDDTFTDDGD 300
KFKEKLQTGK   YGAVMIGSFV   NQGIPLQTFK   AANPDSEYIA   IDGIQSTQGN   KATLTQAGIS 360
GWMINYIGKN   CKDPAKAMQV   FTYLLSDEGE   MLTNFGIEGQ   TYTKEGDKVK   WTDEARKIQQ 420
DDPEKWQLEY   RMGEFIQFGH   DRFKAMNDDS   YVDAVKQMQQ   WGEGKLTSQF   LTENIGPDAG 480
SQEARALSAI   QTNWSTTLVG   MLRAKDDKEL   DGLLNKYEDF   QKDNKIDDVN   KVRNDKIEEN 540
KKKLDM 546
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A133CZN8-F1-model_v4 41 542 28 502 0.7134 0.8001
AF-A0A133D019-F1-model_v4 63 543 36 485 0.6485 0.7526
AF-P76042-F1-model_v4 44 532 22 430 0.6015 0.7201
AF-K0F002-F1-model_v4 23 532 33 439 0.5976 0.7245
AF-A0A133CSA1-F1-model_v4 46 526 22 427 0.5975 0.7169
AF-Q8DNU8-F1-model_v4 60 533 35 440 0.5968 0.7281
AF-K0F1Y0-F1-model_v4 33 533 41 433 0.5882 0.7294
AF-Q8DRJ6-F1-model_v4 61 546 59 514 0.5775 0.6825
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A0M1Q963 GH43_11 38 542 35 506 0.7015 0.7947
AF-A0A7U1BNH7-F1-model_v4 GH10 61 538 26 744 0.477 0.6267
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A0M1Q963 GH43_11 38 542 35 506 0.7015 0.7947
A0A7U1BNH7 GH10 61 538 26 744 0.477 0.6267
A0A9Q8PNJ5 GH4 1 532 99 866 0.476 0.6029
UJP10085.1 GH154 11 503 156 1168 0.3505 0.5509
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
6fth-assembly1.cif.gz_A 61 546 1 496 0.7569 0.8243
3omb-assembly1.cif.gz_A 41 542 1 503 0.7542 0.8028
5xs8-assembly1.cif.gz_A 64 537 1 474 0.7509 0.8208
4tqu-assembly1.cif.gz_Q 55 546 2 492 0.7283 0.7859
5h6u-assembly1.cif.gz_A 56 546 1 487 0.7277 0.7876
6jhx-assembly2.cif.gz_B 55 542 1 483 0.7276 0.7903
5g5y-assembly1.cif.gz_A 61 545 1 494 0.7271 0.7954
3vlw-assembly2.cif.gz_B 56 546 1 489 0.7267 0.785
5g62-assembly2.cif.gz_B 65 546 1 491 0.7237 0.7925
5suo-assembly1.cif.gz_A 64 546 1 451 0.6751 0.7574
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A0H2URD6-F1-model_v4 40 545 33 538 0.7269 0.7941
AF-P37966-F1-model_v4 43 541 28 502 0.7229 0.8101
AF-Q795R2-F1-model_v4 41 542 30 498 0.7022 0.7946
AF-Q8FVS7-F1-model_v4 61 532 21 411 0.6383 0.7763
AF-Q578M8-F1-model_v4 61 532 21 411 0.6377 0.7755
AF-Q2YKZ9-F1-model_v4 61 532 21 411 0.637 0.7749
AF-A0QXD9-F1-model_v4 12 532 36 477 0.6143 0.7209
AF-O50499-F1-model_v4 6 541 3 469 0.6142 0.6844
AF-O31518-F1-model_v4 46 529 26 427 0.6047 0.7323
AF-Q55471-F1-model_v4 40 532 24 421 0.6027 0.7317
Download Full SwissProt Results