PROTEIN: ShaoY_2019_ERR3405861_bin.6_k141_8239_43
Loading protein structure...
Loading protein structure...
Protein File & Metadata
Source:
ShaoY_2019_ERR3405861_bin.6_k141_8239_43.pdb
Genome ID:
Protein ID:
ShaoY_2019_ERR3405861_bin.6_k141_8239_43
Loading protein structure information...
Detailed structural information will appear here after analysis...
Protein Sequence
MYERPDVPKP GRHRTAVAVA VLVAIGCALL VGLPALWRLA NETNASTLAD GGLREAVASR 60 DNTLAVPDGA EPTGNDVETF LVLTVDDVRA DAPALQGAEL LCVDHTAKDS RRVTLPTDLA 120 VTSGGAATTL ADLFDSRGEG ACVAPVSAAT GLAVSHVVEL DGDGWSLFER AVAGGVQGAA 180 QAGPELLSSL RTDMDTGQLM DLPDSLAGTG VSAAEPEPCP MVGSEVDRTA LGVLAGTLRG 240
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q2FVV8-F1-model_v4 | 37 | 239 | 28 | 306 | 0.5566 |
0.7441 |
| AF-A0A133CEN2-F1-model_v4 | 41 | 240 | 41 | 313 | 0.5558 |
0.759 |
| AF-Q8DNG0-F1-model_v4 | 37 | 240 | 30 | 313 | 0.5302 |
0.7297 |
| AF-Q7APX1-F1-model_v4 | 9 | 240 | 18 | 472 | 0.5253 |
0.7495 |
| AF-X8EX96-F1-model_v4 | 55 | 240 | 12 | 285 | 0.5249 |
0.7441 |
| AF-Q7BHL7-F1-model_v4 | 40 | 239 | 62 | 327 | 0.5238 |
0.7275 |
| AF-P52078-F1-model_v4 | 37 | 240 | 29 | 317 | 0.5123 |
0.7548 |
| AF-A0A077ZKB0-F1-model_v4 | 40 | 240 | 36 | 311 | 0.5104 |
0.7667 |
| AF-A0A132P395-F1-model_v4 | 40 | 240 | 35 | 309 | 0.5092 |
0.7641 |
| AF-O06347-F1-model_v4 | 1 | 240 | 10 | 365 | 0.5012 |
0.694 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A1Z1WPI7-F1-model_v4 | GT2 | 1 | 240 | 5 | 1074 | 0.4065 |
0.6912 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A1Z1WPI7 | GT2 | 1 | 240 | 5 | 1074 | 0.4065 |
0.6912 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 3pe5-assembly2.cif.gz_B | 61 | 240 | 1 | 270 | 0.5647 |
0.8085 |
| 6mps-assembly1.cif.gz_A | 48 | 239 | 1 | 254 | 0.5583 |
0.7271 |
| 3mej-assembly1.cif.gz_A | 49 | 239 | 1 | 250 | 0.5566 |
0.7219 |
| 6mpt-assembly1.cif.gz_A | 48 | 239 | 1 | 252 | 0.5551 |
0.7205 |
| 4de9-assembly1.cif.gz_A | 48 | 239 | 1 | 239 | 0.545 |
0.6913 |
| 3nxh-assembly1.cif.gz_A | 75 | 239 | 3 | 216 | 0.5431 |
0.7537 |
| 6uex-assembly1.cif.gz_A | 76 | 239 | 1 | 247 | 0.5393 |
0.7962 |
| 6uf5-assembly1.cif.gz_A | 50 | 239 | 1 | 244 | 0.5387 |
0.6958 |
| 3okz-assembly2.cif.gz_B | 54 | 240 | 1 | 274 | 0.532 |
0.7528 |
| 6uf3-assembly1.cif.gz_A | 75 | 239 | 3 | 251 | 0.5317 |
0.7864 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9K6Q8-F1-model_v4 | 37 | 239 | 29 | 303 | 0.574 |
0.7638 |
| AF-Q65E87-F1-model_v4 | 37 | 239 | 37 | 305 | 0.5504 |
0.7341 |
| AF-Q7WY78-F1-model_v4 | 37 | 239 | 41 | 321 | 0.5485 |
0.7464 |
| AF-Q02115-F1-model_v4 | 37 | 239 | 37 | 305 | 0.5481 |
0.7313 |
| AF-Q836A6-F1-model_v4 | 41 | 240 | 35 | 303 | 0.5466 |
0.7359 |
| AF-Q815A2-F1-model_v4 | 40 | 239 | 33 | 303 | 0.5457 |
0.7348 |
| AF-Q630Y6-F1-model_v4 | 41 | 239 | 33 | 302 | 0.5454 |
0.7375 |
| AF-B7JGI9-F1-model_v4 | 41 | 239 | 33 | 301 | 0.5442 |
0.7368 |
| AF-C3LEN7-F1-model_v4 | 41 | 239 | 33 | 301 | 0.5442 |
0.7362 |
| AF-C3P1B4-F1-model_v4 | 41 | 239 | 33 | 302 | 0.5437 |
0.7353 |