PROTEIN: ShaoY_2019_ERR3405857_bin.6_k141_33488_168
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Protein File & Metadata
Source:
ShaoY_2019_ERR3405857_bin.6_k141_33488_168.pdb
Genome ID:
Protein ID:
ShaoY_2019_ERR3405857_bin.6_k141_33488_168
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Protein Sequence
MGERLIIGFG SALEFWRRAR AAAPSAPDLE PAGHVFGVQR LSVPDRAARV CEGYGLEAPL 60 TLVAAGRERR YACRGVSYLT WSGPLPDALL FGLGDDVYVC RMPLALSQLS RSYDVVGLAE 120 VGYEMTGTYG LAPWAYDDLV KDVQPLVDVS ELVSYAQTAR ALGVYGAGKA LASLALVVSR 180 SNSPRETGLG IYMMQSRVRG GVQFGGFRMN ESLELPPRLQ ELLGQRVVKP DFLWPNGTVV 240 EYDSDEWHLS PRKKAADERK RRAYRAEGLD YLTMTSDIPR SQKKLDAFMA DLEKSLGLRR 300 RPASAAMELR RRELRERLFG PESDDAALAR PR 332
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-X8F7D3-F1-model_v4 | 2 | 298 | 34 | 260 | 0.5713 |
0.7451 |
| AF-O53562-F1-model_v4 | 2 | 297 | 54 | 279 | 0.5548 |
0.7452 |
| AF-P71763-F1-model_v4 | 2 | 297 | 54 | 280 | 0.5471 |
0.7345 |
| AF-O53421-F1-model_v4 | 2 | 298 | 55 | 281 | 0.5447 |
0.7338 |
| AF-O69681-F1-model_v4 | 2 | 300 | 69 | 296 | 0.5413 |
0.7416 |
| AF-P9WLG5-F1-model_v4 | 2 | 298 | 42 | 269 | 0.538 |
0.7097 |
| AF-X8FGK9-F1-model_v4 | 2 | 298 | 42 | 269 | 0.5324 |
0.7013 |
| AF-K0EUR6-F1-model_v4 | 2 | 298 | 66 | 303 | 0.5231 |
0.72 |
| AF-K0EII9-F1-model_v4 | 2 | 298 | 76 | 314 | 0.5197 |
0.7276 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - CAZyme-ID50
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P9WLG4-F1-model_v4 | 2 | 298 | 42 | 269 | 0.5407 |
0.7132 |
| AF-P9WLG5-F1-model_v4 | 2 | 298 | 42 | 269 | 0.538 |
0.7097 |