PROTEIN: ShaoY_2019_ERR3405831_bin.2_k141_6898_83
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Protein File & Metadata
Source:
ShaoY_2019_ERR3405831_bin.2_k141_6898_83.pdb
Genome ID:
Protein ID:
ShaoY_2019_ERR3405831_bin.2_k141_6898_83
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Protein Sequence
MNKDIYILQE LGKQYAQSMA DPVNEKRKKL HTAVNDLTPI RPIVLINEVP WNEFNHENAL 60 KLSCTDPYLR SVERTLRQIL YQWNHFPGDM ILPDYFSVPK IVHSSGIGID VEEHTIATEL 120 ENQIVSHEYF DHLETVDQLE RLHSPVITYD YRETIRQFDL LSDVFQDTLP VRMQGLEYHV 180 VPWDDIVRYR GAANLLMDLL ERPEFMHAII EKMTCIALDT IRQYEELNLF EPSQLSIHCT 240 SALTSDLPKK DFDPDHVRAR DVWGRGAAQI FASASPDMHK EFDINYMIRS LAPFGLNYYG 300 CCEPLHTKID LVEQIPNLRK ISISPWADID IAAEIIQRKY VLSAKPSPSN VASSQLDLQV 360 IQKELAHLTG ACSKNNCSYE LILKDISTIG HNPENLVKWE KCAMAMVN 408
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q2FXA3-F1-model_v4 | 17 | 408 | 1 | 344 | 0.6567 |
0.7342 |
| AF-A0A1C1CI81-F1-model_v4 | 19 | 408 | 6 | 363 | 0.6544 |
0.72 |
| AF-O25325-F1-model_v4 | 28 | 408 | 1 | 338 | 0.6466 |
0.7269 |
| AF-X8F7B5-F1-model_v4 | 24 | 406 | 6 | 353 | 0.6391 |
0.7147 |
| AF-P9WFE1-F1-model_v4 | 24 | 406 | 6 | 357 | 0.6376 |
0.7106 |
| AF-K0F8L7-F1-model_v4 | 25 | 407 | 8 | 351 | 0.6375 |
0.7172 |
| AF-O22886-F1-model_v4 | 20 | 408 | 46 | 394 | 0.6146 |
0.7184 |
| AF-Q9AXB0-F1-model_v4 | 17 | 408 | 35 | 386 | 0.6078 |
0.7108 |
| AF-Q93ZB6-F1-model_v4 | 25 | 408 | 57 | 399 | 0.587 |
0.7149 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - CAZyme-ID50
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 3cyv-assembly1.cif.gz_A-2 | 19 | 408 | 1 | 348 | 0.6505 |
0.7243 |
| 2inf-assembly2.cif.gz_D | 24 | 408 | 1 | 340 | 0.6487 |
0.7311 |
| 4zr8-assembly1.cif.gz_B | 24 | 408 | 1 | 350 | 0.6481 |
0.7215 |
| 4ay8-assembly2.cif.gz_B | 23 | 408 | 3 | 340 | 0.6472 |
0.73 |
| 6w2o-assembly1.cif.gz_A | 19 | 408 | 1 | 354 | 0.642 |
0.7089 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q8CNS0-F1-model_v4 | 4 | 408 | 1 | 352 | 0.6682 |
0.7393 |
| AF-Q72L31-F1-model_v4 | 20 | 408 | 1 | 341 | 0.66 |
0.7392 |
| AF-Q49YM7-F1-model_v4 | 20 | 408 | 1 | 343 | 0.6597 |
0.7377 |
| AF-Q5SKP2-F1-model_v4 | 19 | 408 | 1 | 341 | 0.6592 |
0.7383 |
| AF-B9DN00-F1-model_v4 | 20 | 408 | 1 | 343 | 0.6585 |
0.7375 |
| AF-Q6GFM3-F1-model_v4 | 16 | 408 | 1 | 344 | 0.658 |
0.7354 |
| AF-A8FBM5-F1-model_v4 | 13 | 408 | 1 | 345 | 0.6575 |
0.7389 |
| AF-Q5HEU2-F1-model_v4 | 16 | 408 | 1 | 344 | 0.6573 |
0.734 |
| AF-P67421-F1-model_v4 | 16 | 408 | 1 | 344 | 0.6571 |
0.7338 |
| AF-C5D6M5-F1-model_v4 | 16 | 408 | 1 | 343 | 0.6568 |
0.7349 |