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PROTEIN: ShaoY_2019_ERR3405831_bin.2_k141_4852_15

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Protein File & Metadata
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Source:
ShaoY_2019_ERR3405831_bin.2_k141_4852_15.pdb
Genome ID:
ShaoY_2019_ERR3405831_bin.2
Protein ID:
ShaoY_2019_ERR3405831_bin.2_k141_4852_15

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Detailed structural information will appear here after analysis...

Protein Sequence 
MRSKKVKRIA   ASVAAIAMTT   SLIAGCSKGN   VKNGEAKDNE   VIELNIVTNC   GITSSQDDPN 60
YPYKIFDEIE   KETGVRLTYT   NYTDEALKVL   LAGGDLGDIV   CVSKDYVQPM   IEGGHVISLD 120
EFVESGDKNI   TKFHPKRVEF   SRKFMSNGTD   KLYFLTPGAT   AGGHTGDVWN   GYYVRWDYYK 180
ELGYPEIKDE   DSYLKVLSDM   QKAHPETEDG   KKTYGVAFFN   DWNGLWGWWY   ARAFNQGYYN 240
WGTGGYMYDT   DDGSIINNYL   NPDSPLWQSL   EFGYKANQMG   LLDPDSFTMK   KADLSAKAQA 300
GQYLGSSINW   DINLYYTAEA   QKDPDTRKGY   VAVPVEGNYI   VANNGTDIGD   SSKQIAVTQN 360
CKYPEKAMEV   LNYLFSEEGA   RLFYNGIEGE   DWEVTDGVPK   LKQEILEASK   SGSDEWKKTG 420
INNGNFNNFI   GLGAFDISEK   DGTALNLWNA   EEVYKNNMSA   LDKEICEYYG   VDYKYEIYEK 480
AMNEGKMKDF   SGPWHDIPAA   MPTTDDDIKR   IDSTLDEIMT   RAIPNVVLAA   DEKAFEAEKE 540
KVIQELKAAK   AEISQEWWFT   EWEKAKAFAV   GE 572
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A133CZN8-F1-model_v4 5 568 11 502 0.6647 0.7398
AF-A0A133D019-F1-model_v4 14 568 16 485 0.6518 0.7423
AF-Q8DRJ6-F1-model_v4 17 572 37 514 0.5814 0.6732
AF-A0A133CDW9-F1-model_v4 34 561 37 444 0.5767 0.714
AF-O53485-F1-model_v4 6 561 22 438 0.5741 0.6943
AF-A0A0H3GHK7-F1-model_v4 36 564 17 432 0.5741 0.6951
AF-Q8DNU8-F1-model_v4 35 561 34 440 0.5719 0.7074
AF-K0F8J3-F1-model_v4 12 561 20 434 0.5699 0.69
AF-Q9CBN6-F1-model_v4 37 558 34 445 0.5687 0.7002
AF-K0F002-F1-model_v4 23 558 34 439 0.5673 0.7026
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A0M1Q963 GH43_11 27 572 33 506 0.6621 0.7641
AF-K8EJG7-F1-model_v4 CBM50 , CE4 34 561 30 417 0.5521 0.6935
A0A9Q8PNJ5 GH4 1 558 99 866 0.4472 0.5562
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A0M1Q963 GH43_11 27 572 33 506 0.6621 0.7641
K8EJG7 CBM50 , CE4 34 561 30 417 0.5521 0.6935
A0A9Q8PNJ5 GH4 1 558 99 866 0.4472 0.5562
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
3omb-assembly1.cif.gz_A 34 567 1 503 0.7225 0.7861
6fth-assembly1.cif.gz_A 37 572 1 496 0.7208 0.7893
5xs8-assembly1.cif.gz_A 41 566 1 474 0.7158 0.7995
5g62-assembly2.cif.gz_B 42 572 1 491 0.7094 0.7807
5h6u-assembly1.cif.gz_A 35 572 3 487 0.705 0.7822
3vlw-assembly2.cif.gz_B 35 572 5 489 0.7036 0.7821
5g5y-assembly1.cif.gz_A 38 571 1 494 0.7036 0.7739
4tqu-assembly1.cif.gz_Q 36 572 5 492 0.7029 0.7793
6jhx-assembly2.cif.gz_B 38 568 7 483 0.697 0.781
5suo-assembly1.cif.gz_A 41 572 1 451 0.6752 0.7705
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A0H2URD6-F1-model_v4 30 572 30 536 0.6957 0.7762
AF-P37966-F1-model_v4 32 567 30 502 0.6739 0.7755
AF-Q795R2-F1-model_v4 18 568 8 498 0.6268 0.6987
AF-A0A0H2UMY0-F1-model_v4 6 572 20 491 0.5944 0.6826
AF-Q8FVS7-F1-model_v4 35 558 19 411 0.5922 0.7308
AF-Q578M8-F1-model_v4 35 558 20 411 0.5909 0.731
AF-Q2YKZ9-F1-model_v4 35 558 19 411 0.5899 0.7282
AF-Q7LYW7-F1-model_v4 37 561 39 450 0.5681 0.7017
AF-A0QXD9-F1-model_v4 17 558 34 477 0.557 0.6637
AF-O32156-F1-model_v4 26 561 18 422 0.5567 0.6786
Download Full SwissProt Results