PROTEIN: ShaoY_2019_ERR3405831_bin.2_k141_4852_10
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Protein File & Metadata
Source:
ShaoY_2019_ERR3405831_bin.2_k141_4852_10.pdb
Genome ID:
Protein ID:
ShaoY_2019_ERR3405831_bin.2_k141_4852_10
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Protein Sequence
MMAKEKQYLR ELAKRQAAYA NLPEMEQKKK KWMDVNTGKK TIPPVVVETE TFRQDMVPDY 60 MLYCTDPMAR EMEYRFLKYI REFELIQDDK VIPDVFEIPI QTEIDEFGFP VEECHALDAN 120 GRDVGYEYHS PIRDLEEDFH RLKAAVIKVD NDKTRRSYEF AQDILDGIMP VSLTGTPPMI 180 ALPFQAVKLL GLENYMMSMY DCPETLHKLM HYLTENQLKV MKYYEDNAIL TLNNGNQETC 240 LSSYGFTDRL PATGAESPAL KDIWIWAEAE EAASISPEMF REFCLPYMAK TCREMGLIYY 300 GCCEPMHDIW QDVIREIPNI QKVSVSPWSN QQKMGEMLKG TDVVFSRKPY ANYLGVESRL 360 DEEAWAKHIK ETLDAAKGCQ CEFIMRDVYR VRNLEDVRRA VDIVRRLGEE N 411
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q2FXA3-F1-model_v4 | 18 | 410 | 1 | 345 | 0.6683 |
0.745 |
| AF-Q5A5N0-F1-model_v4 | 20 | 411 | 5 | 361 | 0.6615 |
0.7303 |
| AF-Q9USJ5-F1-model_v4 | 25 | 410 | 1 | 355 | 0.6613 |
0.7273 |
| AF-A0A175VUB7-F1-model_v4 | 20 | 411 | 7 | 369 | 0.6579 |
0.7254 |
| AF-U7PS69-F1-model_v4 | 20 | 410 | 6 | 371 | 0.6533 |
0.7144 |
| AF-O25325-F1-model_v4 | 29 | 410 | 1 | 339 | 0.6533 |
0.7338 |
| AF-G4VSS2-F1-model_v4 | 20 | 411 | 6 | 362 | 0.651 |
0.7213 |
| AF-Q9PN54-F1-model_v4 | 29 | 410 | 1 | 340 | 0.6509 |
0.7301 |
| AF-Q54DF9-F1-model_v4 | 20 | 411 | 12 | 361 | 0.6493 |
0.7322 |
| AF-Q9PTS2-F1-model_v4 | 1 | 411 | 1 | 366 | 0.6452 |
0.7041 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - CAZyme-ID50
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 2inf-assembly2.cif.gz_D | 25 | 411 | 1 | 342 | 0.664 |
0.7457 |
| 1r3s-assembly1.cif.gz_A | 20 | 411 | 2 | 354 | 0.6561 |
0.7269 |
| 4ay8-assembly2.cif.gz_B | 24 | 410 | 3 | 340 | 0.655 |
0.739 |
| 3gw0-assembly1.cif.gz_A-2 | 20 | 411 | 2 | 354 | 0.6546 |
0.726 |
| 3gvv-assembly1.cif.gz_A | 20 | 411 | 2 | 354 | 0.6538 |
0.7242 |
| 2q6z-assembly1.cif.gz_A | 20 | 411 | 2 | 354 | 0.6524 |
0.723 |
| 1jpi-assembly1.cif.gz_A-2 | 20 | 411 | 3 | 355 | 0.652 |
0.7236 |
| 1jph-assembly1.cif.gz_A-2 | 20 | 411 | 3 | 355 | 0.6517 |
0.7232 |
| 1jpk-assembly1.cif.gz_A-2 | 20 | 411 | 3 | 355 | 0.6517 |
0.7232 |
| 3gw3-assembly1.cif.gz_A-2 | 20 | 411 | 3 | 355 | 0.6509 |
0.7229 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q8CNS0-F1-model_v4 | 5 | 410 | 1 | 353 | 0.6787 |
0.7491 |
| AF-B5YK82-F1-model_v4 | 26 | 411 | 1 | 337 | 0.6734 |
0.7588 |
| AF-A8FBM5-F1-model_v4 | 14 | 411 | 1 | 348 | 0.6688 |
0.7474 |
| AF-Q2FXA3-F1-model_v4 | 18 | 410 | 1 | 345 | 0.6683 |
0.745 |
| AF-Q6GFM3-F1-model_v4 | 18 | 410 | 1 | 345 | 0.6682 |
0.7449 |
| AF-Q5HEU2-F1-model_v4 | 18 | 410 | 1 | 345 | 0.6682 |
0.7448 |
| AF-P67421-F1-model_v4 | 18 | 410 | 1 | 345 | 0.6682 |
0.7448 |
| AF-A7Z323-F1-model_v4 | 14 | 411 | 1 | 347 | 0.6681 |
0.7481 |
| AF-Q4L7D8-F1-model_v4 | 20 | 410 | 1 | 344 | 0.6671 |
0.7445 |
| AF-A7X3T8-F1-model_v4 | 18 | 410 | 1 | 345 | 0.6669 |
0.7435 |