PROTEIN: ShaoY_2019_ERR3405831_bin.2_k141_4456_4
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Protein File & Metadata
Source:
ShaoY_2019_ERR3405831_bin.2_k141_4456_4.pdb
Genome ID:
Protein ID:
ShaoY_2019_ERR3405831_bin.2_k141_4456_4
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Protein Sequence
MLIENTEYGR IEIIDIPLPD GIDTNINGTY TFSGRVLVSV REPEKDENWY RVFTISEEGR 60 DLCELFAGVI PMKKGANGIR WMCYSDNKRI LLGDYVLECT PDLDRCTSCE LVEVIFPKEI 120 YKIPGLFMRW SEPLIAPDNE HICFSSLTGN GVFNFLGSLV RKESHYEMED MCIISTVNEV 180 EPDLENEGFS RTQVSRGGEV KQFVRGGRGL TLAGGGTCIT ESTLQMLDTE EVAQITETLG 240 YEETAIFSPN EQYAVCMSPR FSPKTDCGVL GVVPLHKDNI TRRKYLNVLY QYAISGVRYE 300 KAGNIGPVLI DVQRSMSEGR AYEGINLSDP EGKWVYYSPM SWHPDSTKAM WNESTRLIEG 360 KVKSRLRKCR LLDVQPSKPE MWGVTPGKKE IPYALPMEYA RMQTELPYPV KIEGVCGIVL 420 NSYIAGDTVE TRYDHYSEDG KTFYDGWIRV KAPANMFLPE ETVIWSNLQV TGEHTGQMKL 480 RITFLPDSRF QVHLAKDMDE DGKPKSYGFA EYDGLRRNVE DMAD 524
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-U7PUY8-F1-model_v4 | 6 | 524 | 32 | 650 | 0.7306 |
0.8275 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A9Q8SZ27 | GH1 | 20 | 524 | 479 | 1045 | 0.5851 |
0.809 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A9Q8SZ27 | GH1 | 20 | 524 | 479 | 1045 | 0.5851 |
0.809 |
| WHH59204.1 | GH33 | 4 | 376 | 1 | 356 | 0.5699 |
0.6929 |
| A0A517MVI7 | GH33 | 8 | 515 | 40 | 409 | 0.5371 |
0.6722 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.