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PROTEIN: ShaoY_2019_ERR3405831_bin.2_k141_3002_22

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Protein File & Metadata
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Source:
ShaoY_2019_ERR3405831_bin.2_k141_3002_22.pdb
Genome ID:
ShaoY_2019_ERR3405831_bin.2
Protein ID:
ShaoY_2019_ERR3405831_bin.2_k141_3002_22

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Detailed structural information will appear here after analysis...

Protein Sequence 
MKIKIVMLAV   LAILLCLLWG   CREDGPAETE   KRLPESLQNA   DLSQHLEISI   GFWNIQAMEN 60
SKEKDGVWRY   LEDLFNISIQ   PVNLNWSDYN   ERYLVMGVSD   SLPDIFAATT   ITGTSENNAL 120
SLTDMISRKM   LTPLPDDLSA   YPEVKKTVDS   LQHFLEQKDG   KIYTFPRTSF   GDMDLSSSDA 180
GLLVRKDWLH   NLGLEEPESL   DAFIDMTVAF   ATQDPDENGA   DDTLGYNVGN   RTALGKWLIL 240
GIAPECNVYT   WVKKDGKFLP   SYLLPEFEDV   VKAYRKLYVS   GGLDPEFYLK   KTVDSVYDFA 300
RGKLGALEYK   TSPAALSEIK   AYWNHYHDQT   EPFEDAVSIL   NIFPCADGKR   YSNSSSPFWS 360
ESLFSSHVDD   KKMERILYLY   EYLLSEEGWY   LTRFGIEGED   YDLKNGEYTC   LLDTSSENVS 420
ELLLKKYPSL   NLFTSLASWG   GTDDDFISSE   QNNKRYGRKI   MEMSNGALHW   NQENTSMVER 480
PYDFLQMSKE   ESDIFSTSTM   IDEFTKVIIG   QEDAVDMWHE   VIRRWENDGI   QTYIDDLNKQ 540
AEMLNIK 547
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A133CZN8-F1-model_v4 39 546 32 502 0.712 0.8065
AF-A0A133D019-F1-model_v4 44 547 36 485 0.6822 0.7906
AF-Q8DNU2-F1-model_v4 37 540 32 445 0.6549 0.7867
AF-A0A0H3GX53-F1-model_v4 41 540 21 428 0.6496 0.7768
AF-A0A133CPC5-F1-model_v4 41 536 31 423 0.6448 0.7915
AF-Q32AT3-F1-model_v4 43 543 21 437 0.6409 0.7597
AF-Q7CPK0-F1-model_v4 43 543 21 437 0.6407 0.7598
AF-A0A0H3H458-F1-model_v4 42 543 21 437 0.6403 0.7594
AF-P0AG80-F1-model_v4 43 543 21 437 0.639 0.7576
AF-A0A133CDW9-F1-model_v4 43 539 42 444 0.6337 0.7783
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A0M1Q963 GH43_11 39 547 41 506 0.7641 0.8722
AF-K8EJG7-F1-model_v4 CBM50 , CE4 43 539 33 417 0.6258 0.7774
AF-A0A7U1BNH7-F1-model_v4 GH10 42 545 27 745 0.505 0.6339
AF-A0A1Q2TKJ3-F1-model_v4 GH49 44 537 386 797 0.4908 0.7532
A0A9Q8PNJ5 GH4 23 537 449 866 0.4815 0.7521
UJP10085.1 GH154 39 512 704 1167 0.3625 0.605
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A0M1Q963 GH43_11 39 547 41 506 0.7641 0.8722
K8EJG7 CBM50 , CE4 43 539 33 417 0.6258 0.7774
A0A7U1BNH7 GH10 42 545 27 745 0.505 0.6339
A0A1Q2TKJ3 GH49 44 537 386 797 0.4908 0.7532
A0A9Q8PNJ5 GH4 23 537 449 866 0.4815 0.7521
UJP10085.1 GH154 39 512 704 1167 0.3625 0.605
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
4tqu-assembly1.cif.gz_Q 30 547 1 491 0.778 0.8372
3vlw-assembly2.cif.gz_B 31 547 1 489 0.7775 0.8376
5h6u-assembly1.cif.gz_A 33 547 1 487 0.7763 0.8379
6jhx-assembly2.cif.gz_B 30 547 1 483 0.7734 0.8377
5xs8-assembly1.cif.gz_A 45 546 1 474 0.7721 0.8432
5g62-assembly2.cif.gz_B 45 547 1 490 0.7512 0.81
6fth-assembly1.cif.gz_A 41 547 1 496 0.7276 0.7827
3omb-assembly1.cif.gz_A 42 547 5 503 0.7172 0.7726
5g5y-assembly1.cif.gz_A 42 547 1 492 0.7024 0.7632
5suo-assembly1.cif.gz_A 45 547 1 451 0.6978 0.7815
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-P37966-F1-model_v4 41 547 32 502 0.7543 0.8512
AF-A0A0H2URD6-F1-model_v4 37 547 39 536 0.6995 0.7787
AF-Q795R2-F1-model_v4 38 545 36 498 0.6804 0.7813
AF-Q2YKZ9-F1-model_v4 43 537 23 411 0.6717 0.8195
AF-Q8FVS7-F1-model_v4 43 537 23 411 0.6714 0.8192
AF-Q578M8-F1-model_v4 43 537 23 411 0.6714 0.8192
AF-Q9RUE8-F1-model_v4 41 540 18 420 0.6637 0.7943
AF-Q7LYW7-F1-model_v4 38 539 37 450 0.6566 0.7924
AF-A0QXD9-F1-model_v4 36 537 56 477 0.6418 0.7821
AF-Q5PJK8-F1-model_v4 43 543 21 437 0.641 0.7599
Download Full SwissProt Results