PROTEIN: ShaoY_2019_ERR3405831_bin.2_k141_2538_48
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Protein File & Metadata
Source:
ShaoY_2019_ERR3405831_bin.2_k141_2538_48.pdb
Genome ID:
Protein ID:
ShaoY_2019_ERR3405831_bin.2_k141_2538_48
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Protein Sequence
MKRKLQKAAA LTLAGTMIIG AVTGCGGDKT SATEAKTDQK TEAGSKEADT NKDSENGTEK 60 GSGKESENGS ESGSEDAKGD YTDYSKGFPE KVTIKIPVYD RGFEGWDPTN NYYTKWIQAE 120 FGDKYNVEVQ YVAIGRTTEV TDYMQMIAAG SAPDIIFHYD MPQAVSYYNE GAMQPLDLQE 180 IAYYAPAYSE KLGDTIRDYG EMNGENIFFF ADRDAIYYNW VTLIRQDWLD QVKMEMPTNR 240 EELEAVAQAW KDAGLGTLGE RLVNKSFTYD YAFRGQEVDQ TELSLYSDLN VPALTWKPTE 300 NYLRTLNKEY NEGLIDSEFY LKKEEPDVVG DFVSGKTGTY GFYMTNTTDV INSLTTNDPN 360 AKVAVLDPSA FAPKDSKPYY YEYPSYGMVM GMNAKTTDEQ RAAIWMFLDW MIQDDNLFYL 420 QNGVEGQNYK LDEDGIAVPA ADFNGESKLS NNNNKDYWCL VAEVASYGDE QKNLKANMKT 480 LAPAGYEDLI RQSYDYTKKI ESYGLINTIF TKPVESSSEY ASDLSALWQE VYVDMVTSAP 540 EEFDEKYKAA CEEYLDAGYQ EILDEKQALL DEGAYK 576
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q8DNU8-F1-model_v4 | 87 | 566 | 36 | 440 | 0.6229 |
0.7753 |
| AF-Q8DRJ6-F1-model_v4 | 88 | 576 | 59 | 513 | 0.5984 |
0.7207 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A1Q2TKJ3-F1-model_v4 | GH49 | 5 | 566 | 179 | 797 | 0.4829 |
0.5802 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A1Q2TKJ3 | GH49 | 5 | 566 | 179 | 797 | 0.4829 |
0.5802 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5xs8-assembly1.cif.gz_A | 91 | 576 | 1 | 474 | 0.7108 |
0.7944 |
| 3vlw-assembly2.cif.gz_B | 85 | 576 | 3 | 488 | 0.7023 |
0.7797 |
| 6jhx-assembly2.cif.gz_B | 85 | 576 | 5 | 483 | 0.7021 |
0.7855 |
| 5h6u-assembly1.cif.gz_A | 85 | 576 | 2 | 486 | 0.6986 |
0.7767 |
| 6fth-assembly1.cif.gz_A | 87 | 576 | 1 | 495 | 0.6958 |
0.7718 |
| 4tqu-assembly1.cif.gz_Q | 85 | 575 | 4 | 491 | 0.6944 |
0.7718 |
| 3omb-assembly1.cif.gz_A | 84 | 576 | 2 | 502 | 0.6898 |
0.7661 |
| 5g62-assembly2.cif.gz_B | 91 | 576 | 1 | 490 | 0.6822 |
0.7591 |
| 5g5y-assembly1.cif.gz_A | 86 | 576 | 1 | 492 | 0.6661 |
0.7386 |
| 6wpn-assembly1.cif.gz_A | 93 | 565 | 1 | 395 | 0.6619 |
0.798 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-D4GP35-F1-model_v4 | 18 | 564 | 15 | 459 | 0.5883 |
0.6884 |
| AF-Q9Z3R5-F1-model_v4 | 84 | 565 | 50 | 458 | 0.5876 |
0.7371 |