PROTEIN: ShaoY_2019_ERR3405831_bin.2_k141_2538_131
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Protein File & Metadata
Source:
ShaoY_2019_ERR3405831_bin.2_k141_2538_131.pdb
Genome ID:
Protein ID:
ShaoY_2019_ERR3405831_bin.2_k141_2538_131
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Protein Sequence
MKNKKLFISM HTLGIWLIFG VFFMPDYFGI KIGFALHTQR LVLILIWFCI FRNRSRKMDF 60 LYTIRAFPHN RLIFAYLAVC LYTALLRGDV GTFLYPLFDN ILLFYTMVYL LKNDITLSEM 120 IAYILKFAWI LCILGIFEYI FKFSIFAKME VIPGMYSGMA YRDGVFRITG PAHHPIGYGL 180 FLLIVFPLSC WDRSKQEINL FHKPLFLILV GINIYLTGSR SSLGLFGLEA VVLLLVSAKE 240 RVRLNILIVG YTTIIFLGVS LLFYQTAPMQ AIWSAITKSI DGAFGTSLSE MLGFDKSAVM 300 DSTLYRKELP KIFRLDWLNP LLGRGSSYNF SWVSNGYWIQ SIDNFYVKQY IAIAYPGLIT 360 FVLMSAAFLW DMLRSLVRYP DPLLKLSLII CACYFINLWW VDSLGTLDYV FCLFAAAFVK 420 CQYYRKPRSK I 431
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A0H3H4H7-F1-model_v4 | 4 | 428 | 5 | 388 | 0.7482 |
0.8156 |
| AF-Q8CYC1-F1-model_v4 | 8 | 425 | 14 | 392 | 0.7417 |
0.8249 |
| AF-Q2G288-F1-model_v4 | 7 | 431 | 7 | 412 | 0.7408 |
0.7897 |
| AF-X8F0V5-F1-model_v4 | 2 | 431 | 2 | 464 | 0.678 |
0.7351 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A517MXC4-F1-model_v4 | GT26 | 3 | 431 | 11 | 452 | 0.5915 |
0.7609 |
| AF-B8DZR6-F1-model_v4 | GT9 | 3 | 431 | 35 | 478 | 0.5905 |
0.7698 |
| AF-B5YD26-F1-model_v4 | GT9 | 3 | 431 | 36 | 477 | 0.5901 |
0.7693 |
| AF-B8IGI7-F1-model_v4 | GH16_7 | 5 | 431 | 15 | 462 | 0.5833 |
0.7831 |
| AF-D5MJ04-F1-model_v4 | GT9 | 4 | 431 | 20 | 562 | 0.5708 |
0.7431 |
| USX27957.1 | GT9 | 8 | 431 | 16 | 556 | 0.5675 |
0.7395 |
| AF-H8L3P3-F1-model_v4 | GT2 | 7 | 431 | 15 | 667 | 0.5569 |
0.7212 |
| AF-A0A4V0YNK7-F1-model_v4 | GT25 | 7 | 431 | 263 | 694 | 0.5557 |
0.7022 |
| AF-B8G860-F1-model_v4 | GH39 | 1 | 429 | 539 | 1021 | 0.5365 |
0.7618 |
| AF-A0A160T1R3-F1-model_v4 | GH39 | 2 | 428 | 575 | 1041 | 0.5295 |
0.7601 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| Q4JZZ9 | GT4 | 11 | 426 | 6 | 408 | 0.6779 |
0.7278 |
| A0A517MXC4 | GT26 | 3 | 431 | 11 | 452 | 0.5915 |
0.7609 |
| B5YD26 | GT9 | 3 | 431 | 36 | 477 | 0.5901 |
0.7693 |
| B8IGI7 | GH16_7 | 5 | 431 | 15 | 462 | 0.5833 |
0.7831 |
| D5MJ04 | GT9 | 4 | 431 | 20 | 562 | 0.5708 |
0.7431 |
| USX27957.1 | GT9 | 8 | 431 | 16 | 556 | 0.5675 |
0.7395 |
| H8L3P3 | GT2 | 7 | 431 | 15 | 667 | 0.5569 |
0.7212 |
| A0A160T1R3 | GH39 | 2 | 428 | 575 | 1041 | 0.5295 |
0.7601 |
| A9WHX8 | GH39 | 1 | 429 | 604 | 1083 | 0.5268 |
0.7598 |
| A0A5B7R2V6 | GH5_39 | 5 | 421 | 381 | 787 | 0.5031 |
0.697 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 7tpj-assembly1.cif.gz_B | 8 | 428 | 6 | 403 | 0.6648 |
0.7171 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q00474-F1-model_v4 | 27 | 421 | 4 | 391 | 0.7153 |
0.7812 |
| AF-O32270-F1-model_v4 | 4 | 431 | 51 | 486 | 0.671 |
0.7326 |
| AF-Q02729-F1-model_v4 | 4 | 430 | 2 | 408 | 0.652 |
0.7102 |