PROTEIN: ShaoY_2019_ERR3405831_bin.2_k141_1789_25
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Protein File & Metadata
Source:
ShaoY_2019_ERR3405831_bin.2_k141_1789_25.pdb
Genome ID:
Protein ID:
ShaoY_2019_ERR3405831_bin.2_k141_1789_25
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Protein Sequence
MKKYRAIFFD WDGTAVLSRK APVDEVVVPM KELLARGVKL AVISGTTLEN IAEGRLHEYF 60 SIEERKSLFF GLGRGAYNYA FDDSGNPYLL SHRIPSKSGL IRIHDICYDI HRSLLEDYSI 120 ATDIVFSRPN YCKIDLMVEN NRGESLFLQD GEKEQLLENL SSHGFTGGIR GLIDLAEEMG 180 RKHGTTVCAT TDAKYLEVGI SSKSDNVNDF MDYFGNQYQI REEECSFWGD EYIGFDECLF 240 GSDSYMITDK TRHGEFFDVS DTEGLRPNEV KQVGGGVQSF LRFLGEQNNQ 290
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q4E4A3-F1-model_v4 | 3 | 290 | 2 | 245 | 0.7119 |
0.7991 |
| AF-A4IDG8-F1-model_v4 | 2 | 290 | 2 | 247 | 0.7107 |
0.7946 |
| AF-Q38AW2-F1-model_v4 | 3 | 290 | 2 | 244 | 0.7061 |
0.797 |
| AF-B5DF46-F1-model_v4 | 4 | 289 | 2 | 242 | 0.7029 |
0.7944 |
| AF-Q8ZKU5-F1-model_v4 | 2 | 290 | 1 | 243 | 0.699 |
0.7831 |
| AF-Q54X03-F1-model_v4 | 3 | 290 | 4 | 249 | 0.698 |
0.7847 |
| AF-A0A175VZ70-F1-model_v4 | 16 | 290 | 1 | 229 | 0.6966 |
0.8006 |
| AF-O15305-F1-model_v4 | 1 | 289 | 1 | 246 | 0.6916 |
0.7747 |
| AF-Q32A04-F1-model_v4 | 3 | 290 | 1 | 266 | 0.6907 |
0.7399 |
| AF-P27848-F1-model_v4 | 3 | 290 | 1 | 266 | 0.6905 |
0.7398 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A0G9F9S7 | GH73 | 3 | 289 | 2 | 256 | 0.5971 |
0.6632 |
| APR83787.1 | GH65 | 1 | 290 | 24 | 316 | 0.5915 |
0.9402 |
| AF-A0A0P0Y112-F1-model_v4 | GT4 | 4 | 290 | 232 | 508 | 0.4943 |
0.6654 |
| A0A8K1Y6G1 | CBM48 | 2 | 290 | 376 | 653 | 0.4935 |
0.7164 |
| AF-Q6EZE5-F1-model_v4 | GT4 | 4 | 288 | 287 | 568 | 0.4848 |
0.6678 |
| AF-A0A142VCG2-F1-model_v4 | GT55 | 3 | 290 | 415 | 694 | 0.4845 |
0.7121 |
| AF-Q3Z6S5-F1-model_v4 | GT55 | 3 | 290 | 415 | 692 | 0.4837 |
0.7156 |
| ADJ26179.1 | GT55 | 3 | 290 | 421 | 700 | 0.4834 |
0.7123 |
| AF-A0A0C6EW59-F1-model_v4 | GT55 | 3 | 290 | 415 | 694 | 0.4833 |
0.7105 |
| AF-A0A1S7H222-F1-model_v4 | GT55 | 3 | 290 | 415 | 694 | 0.4829 |
0.7096 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A0G9F9S7 | GH73 | 3 | 289 | 2 | 256 | 0.5971 |
0.6632 |
| APR83787.1 | GH65 | 1 | 290 | 24 | 316 | 0.5915 |
0.9402 |
| A0A8K1Y6G1 | CBM48 | 2 | 290 | 376 | 653 | 0.4935 |
0.7164 |
| ADJ26179.1 | GT55 | 3 | 290 | 421 | 700 | 0.4834 |
0.7123 |
| E1R5J4 | GT4 | 1 | 290 | 8 | 260 | 0.4822 |
0.7809 |
| C0PKY3 | GT4 | 4 | 290 | 330 | 615 | 0.4805 |
0.6688 |
| C8WIJ2 | GT20 | 1 | 290 | 532 | 785 | 0.4682 |
0.7783 |
| A0A7U6JGT4 | GT20 | 1 | 290 | 482 | 729 | 0.4634 |
0.776 |
| WBW74396.1 | GT20 | 1 | 289 | 644 | 901 | 0.4592 |
0.7793 |
| A0A167CI15 | GT20 | 1 | 288 | 645 | 904 | 0.4565 |
0.7696 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 4bnd-assembly2.cif.gz_A | 2 | 290 | 1 | 251 | 0.7037 |
0.7807 |
| 4bnd-assembly2.cif.gz_B | 2 | 290 | 1 | 253 | 0.7037 |
0.7775 |
| 6i5x-assembly1.cif.gz_A | 3 | 290 | 9 | 260 | 0.7016 |
0.7875 |
| 3pgv-assembly4.cif.gz_D | 3 | 290 | 1 | 257 | 0.7016 |
0.7633 |
| 3pgv-assembly3.cif.gz_C | 3 | 290 | 1 | 258 | 0.6994 |
0.7599 |
| 3l7y-assembly1.cif.gz_A | 3 | 290 | 1 | 266 | 0.6989 |
0.7495 |
| 2i54-assembly1.cif.gz_A | 4 | 290 | 1 | 242 | 0.6966 |
0.7851 |
| 3pgv-assembly1.cif.gz_A | 4 | 289 | 1 | 259 | 0.6928 |
0.7513 |
| 1kyt-assembly1.cif.gz_A | 2 | 290 | 1 | 225 | 0.6918 |
0.8027 |
| 1rlt-assembly4.cif.gz_D | 4 | 290 | 1 | 263 | 0.6897 |
0.7484 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P42962-F1-model_v4 | 1 | 289 | 5 | 249 | 0.706 |
0.7923 |
| AF-Q97C22-F1-model_v4 | 3 | 289 | 1 | 224 | 0.699 |
0.8115 |
| AF-A9A492-F1-model_v4 | 2 | 290 | 1 | 229 | 0.6981 |
0.8062 |
| AF-A3CWU5-F1-model_v4 | 3 | 290 | 1 | 230 | 0.6967 |
0.8078 |
| AF-O27143-F1-model_v4 | 4 | 290 | 1 | 221 | 0.6941 |
0.8108 |
| AF-Q2FU45-F1-model_v4 | 3 | 290 | 1 | 228 | 0.692 |
0.8051 |
| AF-Q9HLQ2-F1-model_v4 | 3 | 290 | 1 | 224 | 0.6919 |
0.8042 |
| AF-Q5JDB7-F1-model_v4 | 2 | 290 | 1 | 235 | 0.6918 |
0.7941 |
| AF-O15305-F1-model_v4 | 1 | 289 | 1 | 246 | 0.6916 |
0.7747 |
| AF-Q89B25-F1-model_v4 | 3 | 290 | 1 | 267 | 0.6906 |
0.7413 |