PROTEIN: ShaoY_2019_ERR3405831_bin.2_k141_1077_28
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Protein File & Metadata
Source:
ShaoY_2019_ERR3405831_bin.2_k141_1077_28.pdb
Genome ID:
Protein ID:
ShaoY_2019_ERR3405831_bin.2_k141_1077_28
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Protein Sequence
MYYKEDWEKA KARLTALWDN EVLDRCCISV AAPRDGKTNV HIFAPGECNP DDPKDLEDYW 60 LNPERIWKRN IQRLEQTYFG GESLPLVMPN FGASGHCVYY GGKYTLKPDT IWFDAVVEDL 120 EEHQWKYDRE NIFYRRQREI VKYLAEKGMG NYLLSMPDNC GTLDAIGHLH GSIETMMDMY 180 SCPEAVQSAI STINEGWTDA AETFYQLEKN CNEGGSCVGW MDTWAPGRHA QMQCDMSVMF 240 SPDCYRQFVV PELKKQMEWE EYPVYHFDGK EQINHLDHLL AQKELQMIQW TNVDGQESPA 300 HFIPALKRMQ EAGKKVLVMT PASDIPSLLE NLSSRGLYLH TYANSVDEAN DIIHYVEKNT 360 HA 362
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9PN54-F1-model_v4 | 11 | 358 | 1 | 340 | 0.7107 |
0.7544 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - CAZyme-ID50
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 4ay8-assembly2.cif.gz_B | 6 | 358 | 3 | 340 | 0.7241 |
0.7712 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q48927-F1-model_v4 | 6 | 358 | 2 | 339 | 0.7258 |
0.7721 |
| AF-Q48949-F1-model_v4 | 6 | 358 | 2 | 339 | 0.7257 |
0.7719 |
| AF-B5YK82-F1-model_v4 | 1 | 361 | 1 | 338 | 0.7237 |
0.7702 |
| AF-A5G1D5-F1-model_v4 | 7 | 362 | 3 | 355 | 0.7055 |
0.7431 |
| AF-Q6NJJ4-F1-model_v4 | 1 | 356 | 1 | 344 | 0.7023 |
0.7418 |
| AF-Q48924-F1-model_v4 | 6 | 362 | 3 | 340 | 0.7005 |
0.7725 |
| AF-Q8PUA8-F1-model_v4 | 6 | 362 | 3 | 339 | 0.6986 |
0.7726 |