PROTEIN: ShaoY_2019_ERR3405726_bin.1_k141_838_24
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Protein File & Metadata
Source:
ShaoY_2019_ERR3405726_bin.1_k141_838_24.pdb
Genome ID:
Protein ID:
ShaoY_2019_ERR3405726_bin.1_k141_838_24
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Protein Sequence
MDEHTQLKDS ILAQAHEKGR KLVEEAKESV LKEEAVQEER LIQDKLNQRS EQLKRIQRQL 60 QRETQQIENK KRQSTLVTKQ RVLKDLFAEA YEAMAAWPLE KEVQFVEAVL DHYQGQAVTL 120 TFGAVSAAKF GPADLEHLLQ AHQDLMVSEA TIPAQAGFVL SVGKIDDNYL YRDLVDSIWE 180 QESYQMAASI FTDEAN 196
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A133CMS3-F1-model_v4 | 1 | 192 | 1 | 194 | 0.8892 |
0.9268 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - CAZyme-ID50
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P43436-F1-model_v4 | 2 | 192 | 1 | 193 | 0.9128 |
0.9474 |
| AF-Q8XJW2-F1-model_v4 | 1 | 192 | 1 | 198 | 0.8824 |
0.9283 |
| AF-Q0SSH9-F1-model_v4 | 1 | 193 | 1 | 198 | 0.8815 |
0.9229 |
| AF-Q0TPW4-F1-model_v4 | 1 | 193 | 1 | 198 | 0.8711 |
0.9137 |
| AF-B0K5J3-F1-model_v4 | 1 | 193 | 1 | 200 | 0.8465 |
0.8967 |
| AF-B2TP94-F1-model_v4 | 1 | 193 | 1 | 196 | 0.8445 |
0.8877 |
| AF-B0K8F1-F1-model_v4 | 1 | 193 | 1 | 200 | 0.8414 |
0.8923 |
| AF-B2UWY7-F1-model_v4 | 1 | 193 | 1 | 196 | 0.8402 |
0.8837 |
| AF-Q3ITD1-F1-model_v4 | 2 | 193 | 1 | 192 | 0.8236 |
0.8621 |
| AF-A0PZC3-F1-model_v4 | 1 | 192 | 1 | 198 | 0.8225 |
0.875 |