PROTEIN: ShaoY_2019_ERR3405641_bin.1_k141_3401_11
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Protein File & Metadata
Source:
ShaoY_2019_ERR3405641_bin.1_k141_3401_11.pdb
Genome ID:
Protein ID:
ShaoY_2019_ERR3405641_bin.1_k141_3401_11
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Protein Sequence
MTVVMNNRFI SEKIYLFTLF IWVVVASLVT TTYFVRLDGF LSLYRILLYF TIIMILIKEF 60 ITLPKTLYYF RFHWQQLLIV TAFFISMFIV AKNRDGLLDI NVLLLVFSAR DIDFRKLLGT 120 FSLATFLVLC LTIYASQKGI IANMFMNADG GYRFSLGFNY VSFASQRLFF ALCTYLMFRG 180 KRISYLELLA LLLATIYMHQ QTSTTSPFYL SILILTYALF SVKIFKKEFI IENFWTKTLA 240 HYGFILALAI ILYFCFYSSG NLFHLVDQFT HNRLRLSVDG FRNFGVPLFG QRISFKTLDM 300 FGNFTSNYNY IDSSFVQLLV IDGLIVSVFM LFALTKVMRY FVSIQKDIVL ACLGIMIIHG 360 MFDPQMLVLR YSPLILFISR LFILNDDTKI E 391
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A5P3FVF2-F1-model_v4 | 1 | 391 | 2 | 389 | 0.6902 |
0.7491 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A7D6J0J0-F1-model_v4 | GT4 | 1 | 390 | 8 | 423 | 0.6886 |
0.7426 |
| AF-A0A7L9SQD7-F1-model_v4 | GT4 | 6 | 390 | 20 | 394 | 0.6385 |
0.8802 |
| B7AUF6 | GT4 | 2 | 391 | 10 | 383 | 0.6151 |
0.8713 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A7D6J0J0 | GT4 | 1 | 390 | 8 | 423 | 0.6886 |
0.7426 |
| A0A7L9SQD7 | GT4 | 6 | 390 | 20 | 394 | 0.6385 |
0.8802 |
| B7AUF6 | GT4 | 2 | 391 | 10 | 383 | 0.6151 |
0.8713 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.