PROTEIN: ShaoY_2019_ERR3405630_bin.1_k141_944_3
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Protein File & Metadata
Source:
ShaoY_2019_ERR3405630_bin.1_k141_944_3.pdb
Genome ID:
Protein ID:
ShaoY_2019_ERR3405630_bin.1_k141_944_3
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Protein Sequence
MNHKQIIDRV IRIGLLLLPF LIFYGYRVVK GFDYPVVDDI MVNQTILSGD NMLLPYIGIL 60 LSSALVFLQQ LFTNWNIYFI FLALSFCLSF SIYLEFFFRK KYYFLLPLVM LLQMVLMKYF 120 SFSVIAYLLS TAAILLLFDK KYVTGMLLSV IGLSIRPQII ASLLLLLLPF LAFEVIKGKK 180 KKELFLLSAV ILLIFASNKI YTLMRPDVQE YLNWNTLSTN LRDFPAIEYE KHAKEFQELG 240 VSENDLSAST YWLFAEKDAL NNELLTKIQS VRSFSEKYSF NVFQMVKDYF QNIILTTFLL 300 VMVGWFLFFK PKKVYGWLLP LVPFALIGAL FVRQRVVERV YIPIIISFLI FFVYYAPLFY 360 NKRKLLKKRE IFYSLQLVGM LASMAWVNSV GQELYWFPII QSSMVSEYHD VVEKHSDKLL 420 VFGGYGTLVN SQPSLATITR KPDQLIENTT TLGNWQTFSP HYYQLMKKYN VEEPSNLLSS 480 AIDKENILFF WSPSSGKMDQ VKEIMKEHYQ KDVYFEEVEV VSSDMNLYRL RTGEGR 536
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A517YV87-F1-model_v4 | GT83 | 7 | 531 | 3 | 486 | 0.6336 |
0.6893 |
| AF-A0A060HYH8-F1-model_v4 | GT83 | 2 | 531 | 1 | 492 | 0.6308 |
0.6818 |
| AF-A0A7T5CJ27-F1-model_v4 | GT83 | 7 | 531 | 3 | 483 | 0.6308 |
0.6892 |
| A0A4V0HYL9 | GT83 | 2 | 532 | 13 | 496 | 0.6304 |
0.693 |
| AF-A0A7U4L531-F1-model_v4 | GT83 | 1 | 531 | 1 | 492 | 0.6301 |
0.6812 |
| A0A8D5JSU7 | GT83 | 3 | 531 | 1 | 489 | 0.6299 |
0.6816 |
| AF-A0A1W6GFM2-F1-model_v4 | GT83 | 4 | 531 | 1 | 492 | 0.6273 |
0.6795 |
| AF-A0A192T5U8-F1-model_v4 | GT83 | 1 | 531 | 1 | 492 | 0.6272 |
0.6795 |
| AF-A0A7H8KST0-F1-model_v4 | GT83 | 3 | 531 | 1 | 477 | 0.626 |
0.6843 |
| AF-A0A192LU33-F1-model_v4 | GT83 | 4 | 531 | 3 | 492 | 0.6247 |
0.6773 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| D5EJZ3 | GT83 | 1 | 532 | 14 | 503 | 0.6451 |
0.708 |
| A0A517YV87 | GT83 | 7 | 531 | 3 | 486 | 0.6336 |
0.6893 |
| A0A4V0HYL9 | GT83 | 2 | 532 | 13 | 496 | 0.6304 |
0.693 |
| A0A8D5JSU7 | GT83 | 3 | 531 | 1 | 489 | 0.6299 |
0.6816 |
| A0A1B7ZBG8 | GT83 | 2 | 531 | 1 | 457 | 0.6292 |
0.6992 |
| I0H3R1 | GT83 | 1 | 531 | 1 | 481 | 0.6208 |
0.6802 |
| A0A0U3EJ09 | GT83 | 7 | 529 | 1 | 492 | 0.6186 |
0.672 |
| UAB91770.1 | GT89 | 3 | 536 | 3 | 539 | 0.6162 |
0.6483 |
| A8ZZ91 | GT83 | 11 | 530 | 2 | 471 | 0.6141 |
0.6823 |
| A0A974TGW9 | GT83 | 3 | 531 | 5 | 498 | 0.6129 |
0.6654 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.