PROTEIN: ShaoY_2019_ERR3405592_bin.2_k141_269_16
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Protein File & Metadata
Source:
ShaoY_2019_ERR3405592_bin.2_k141_269_16.pdb
Genome ID:
Protein ID:
ShaoY_2019_ERR3405592_bin.2_k141_269_16
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Protein Sequence
MPMLPYPFSY FSSIWGFRKP LSKRFGLNWF QLLFTSIFLI SLSMVPIAIQ NSSQETYPLD 60 TFIDNVYTPL TDEAIMDLSE NAQIIDGKLS YAGTKNQQPS LLIGPSQNKE LPKDLQLHFD 120 TEELVISKES KELTRIRYHA IQTESFQSKE DLTQAISKDW YQQNRVYISL FLVLGASFLF 180 GLNFFIVSLG ASLLLYITKK SRLFSFRTFK ECYHFILNCL GLPTLITLIL GLFGQNMATL 240 ITVQNILFVL YLVTIFYKTH FRDPDYHK 268
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P59204-F1-model_v4 | 3 | 268 | 1 | 266 | 0.9782 |
0.9893 |
| AF-A0A132ZFQ3-F1-model_v4 | 3 | 267 | 1 | 271 | 0.8598 |
0.8941 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A387DIN9 | GH65 | 1 | 268 | 6 | 274 | 0.8425 |
0.8765 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A387DIN9 | GH65 | 1 | 268 | 6 | 274 | 0.8425 |
0.8765 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P59203-F1-model_v4 | 3 | 268 | 1 | 266 | 0.9796 |
0.9903 |
| AF-P59204-F1-model_v4 | 3 | 268 | 1 | 266 | 0.9782 |
0.9893 |
| AF-Q99ZB6-F1-model_v4 | 1 | 263 | 2 | 271 | 0.8565 |
0.8986 |
| AF-O06992-F1-model_v4 | 1 | 267 | 2 | 282 | 0.7375 |
0.7981 |
| AF-P54485-F1-model_v4 | 5 | 268 | 1 | 250 | 0.5659 |
0.6168 |