PROTEIN: ShaoY_2019_ERR3405000_bin.13_k141_1625_155
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Protein File & Metadata
Source:
ShaoY_2019_ERR3405000_bin.13_k141_1625_155.pdb
Genome ID:
Protein ID:
ShaoY_2019_ERR3405000_bin.13_k141_1625_155
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Protein Sequence
MTISNLFVPI GLYKIRSFQV SDLSCEYSSG EYIGFRLITI ALGFVFVMPY AFFTCQQSSL 60 LPVYLYCIYK SIEVMVDVFH GIDQKAGNMI YCGMSMLLRG ILSLLVFCAG MYISHSLVLS 120 IVLMIAVSLP VAIVDAHWAS NFDLIVPSFR FKAMTELFYK CLPATVGVFC CAAVTSVSRQ 180 ELATVLGASM LGVYSSVCSP AAIVQAGAAN AYAPLLGAFA SASESGDKKS FNTMLMKVVL 240 GALVLSIVIL FACFICGDYM LGLIFGDQIH QYSFLLYGAV ISSLLTAFIG FFSDLTIVKR 300 KMAGNLVGNL VALIVAVPLS GLLIQLFGPN GTSAAISLAY FVGCVAMLPC IIRK 354
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q0PAV6-F1-model_v4 | 1 | 354 | 54 | 439 | 0.7787 |
0.881 |
| AF-A0A132P645-F1-model_v4 | 1 | 354 | 54 | 438 | 0.7742 |
0.8863 |
| AF-Q94AL1-F1-model_v4 | 1 | 354 | 79 | 464 | 0.766 |
0.8962 |
| AF-O25796-F1-model_v4 | 1 | 354 | 58 | 445 | 0.756 |
0.8698 |
| AF-B8A345-F1-model_v4 | 1 | 354 | 98 | 483 | 0.7553 |
0.8963 |
| AF-Q38DL3-F1-model_v4 | 1 | 354 | 70 | 454 | 0.7547 |
0.8835 |
| AF-Q8CWT9-F1-model_v4 | 1 | 354 | 49 | 406 | 0.7528 |
0.8717 |
| AF-K7KBT4-F1-model_v4 | 1 | 354 | 123 | 509 | 0.7319 |
0.8858 |
| AF-Q84K71-F1-model_v4 | 1 | 354 | 120 | 511 | 0.7276 |
0.878 |
| AF-A0A1A6Z3M2-F1-model_v4 | 1 | 354 | 53 | 411 | 0.7238 |
0.8432 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A9W6NQN0 | GT2 | 1 | 354 | 66 | 418 | 0.6353 |
0.8517 |
| A0A1S9M4N4 | GT2 | 1 | 354 | 323 | 692 | 0.633 |
0.8542 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A9W6NQN0 | GT2 | 1 | 354 | 66 | 418 | 0.6353 |
0.8517 |
| A0A1S9M4N4 | GT2 | 1 | 354 | 323 | 692 | 0.633 |
0.8542 |
| A0A2R2WB60 | GT2 | 1 | 353 | 67 | 425 | 0.5094 |
0.7669 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q94AL1-F1-model_v4 | 1 | 354 | 79 | 464 | 0.766 |
0.8962 |
| AF-Q2G140-F1-model_v4 | 1 | 354 | 59 | 440 | 0.7456 |
0.8528 |
| AF-Q7A7N0-F1-model_v4 | 1 | 354 | 59 | 440 | 0.7455 |
0.8527 |
| AF-Q5HIW0-F1-model_v4 | 1 | 354 | 59 | 440 | 0.7446 |
0.8517 |
| AF-Q84K71-F1-model_v4 | 1 | 354 | 120 | 511 | 0.7276 |
0.878 |
| AF-P39855-F1-model_v4 | 1 | 353 | 38 | 396 | 0.6734 |
0.7409 |
| AF-P37781-F1-model_v4 | 1 | 354 | 43 | 416 | 0.6441 |
0.7231 |