PROTEIN: ShaoY_2019_ERR3404958_bin.2_k141_919_61
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Protein File & Metadata
Source:
ShaoY_2019_ERR3404958_bin.2_k141_919_61.pdb
Genome ID:
Protein ID:
ShaoY_2019_ERR3404958_bin.2_k141_919_61
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Protein Sequence
MDEQTQLKDS ILAQAHEKGR KLLEEAKETI LKEETAQEER LIQDRLNQRS EQLKRIQRQL 60 QRETQQIENK KRQSTLVTKQ RVLKDLFADA YEAMAAWPLE KEVQFVDAIL DRYQGQVVTL 120 TFGAVSASKF DPAALEKLKQ THQNVTVADA TIPAQAGFVL SVGKIDDNYL YRDLVDSIWE 180 QESYQMAASI FTDEEN 196
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A133CMS3-F1-model_v4 | 1 | 192 | 1 | 194 | 0.876 |
0.9155 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - CAZyme-ID50
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P43436-F1-model_v4 | 2 | 192 | 1 | 193 | 0.8621 |
0.9046 |
| AF-B0S2A5-F1-model_v4 | 1 | 194 | 1 | 184 | 0.8437 |
0.8967 |
| AF-Q8XJW2-F1-model_v4 | 1 | 193 | 1 | 198 | 0.8263 |
0.8744 |
| AF-Q0SSH9-F1-model_v4 | 1 | 193 | 1 | 198 | 0.8167 |
0.8657 |
| AF-B0K5J3-F1-model_v4 | 1 | 194 | 1 | 200 | 0.7856 |
0.8373 |
| AF-Q0TPW4-F1-model_v4 | 1 | 193 | 1 | 198 | 0.783 |
0.8359 |
| AF-B0K8F1-F1-model_v4 | 1 | 193 | 1 | 200 | 0.778 |
0.8341 |
| AF-B2TP94-F1-model_v4 | 1 | 194 | 1 | 196 | 0.758 |
0.8074 |
| AF-B2UWY7-F1-model_v4 | 1 | 194 | 1 | 196 | 0.7509 |
0.801 |
| AF-A3DHN7-F1-model_v4 | 1 | 194 | 1 | 198 | 0.7481 |
0.7962 |