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PROTEIN: ShaoY_2019_ERR3404958_bin.2_k141_5246_18

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Protein File & Metadata
Download PDB File
Source:
ShaoY_2019_ERR3404958_bin.2_k141_5246_18.pdb
Genome ID:
ShaoY_2019_ERR3404958_bin.2
Protein ID:
ShaoY_2019_ERR3404958_bin.2_k141_5246_18

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Detailed structural information will appear here after analysis...

Protein Sequence 
MFIIASEQTK   ELDRLRKLLD   KLGQPYRVFV   TNLETDIAEQ   TESLATFFTQ   KDPASKVGQP 60
LFFNDLEVPE   LWECWTLGIT   TYLFDGEERR   ANVVLRGDIL   SRTVERVEWF   GQGEEIVSID 120
VYNRYGWRSK   QSLLTEAGQP   YLDIYLNRQQ   EEVLLHFVSQ   GTFLHQLPKG   RDHLYANKEE 180
LQRAVLKQVL   PEDEAILLMD   KTLLDVVKEI   PKERLAYCAR   EAHALDEIKE   HVGQILLVEA 240
GLLSEKKDGI   TALSGLVDVE   QESFQPEALV   MTASQEVEGL   TSLVQQFPQV   TFHIAALTAM 300
GPKLTDLAAR   PNVRLYPGVS   LGNYESLLAR   CSIYLDCNQG   EEVWTSSFHA   LENGLVLFGL 360
KSTVHQEAYK   ELSTITDTVE   EMKQQLEILL   QHPEAFKEML   REQVRILELP   EKNPLKEIFK 420
RLEGGTA 427
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q2G0L3-F1-model_v4 1 424 2 490 0.7006 0.7722
AF-Q2FUW3-F1-model_v4 1 427 2 515 0.6988 0.7838
AF-Q2G0L2-F1-model_v4 1 427 2 496 0.6823 0.7522
AF-Q2FUW7-F1-model_v4 1 426 3 502 0.6817 0.7558
AF-Q2FUW8-F1-model_v4 1 426 1 452 0.5966 0.6384
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A5J6LNV6-F1-model_v4 GT8 1 427 1 427 0.9751 0.9815
A0A1X1KKR5 GT8 1 427 1 427 0.9487 0.9589
A0A9X0WP12 GT8 1 427 1 429 0.9324 0.9502
AF-A0A7L6WMT6-F1-model_v4 GT8 1 427 1 427 0.9302 0.9481
AF-A0A7D4F6T2-F1-model_v4 GT8 1 427 1 430 0.9219 0.9411
AF-A0A1V0H8S9-F1-model_v4 GT8 1 427 1 427 0.9193 0.9388
AF-A0A1V0GEF3-F1-model_v4 GT8 1 427 1 427 0.9183 0.9379
AF-A0A448AE70-F1-model_v4 GT8 1 427 1 430 0.9103 0.9307
A0A1S1DKP0 GT8 1 427 1 427 0.8757 0.8992
E7S943 GT8 1 427 1 411 0.8001 0.8401
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A1X1KKR5 GT8 1 427 1 427 0.9487 0.9589
A0A9X0WP12 GT8 1 427 1 429 0.9324 0.9502
A0A1S1DKP0 GT8 1 427 1 427 0.8757 0.8992
E7S943 GT8 1 427 1 411 0.8001 0.8401
A0A2I5KEN8 GT8 1 425 1 429 0.7808 0.8099
UTX36759.1 GT8 1 423 3 420 0.7433 0.7809
A0A8D4ST60 GT4 1 426 2 502 0.707 0.7832
WHO85869.1 GT4 1 426 2 501 0.7023 0.7769
A0A0D6G869 GT4 1 424 2 490 0.7008 0.7723
A0A192GZ51 GT4 1 424 2 498 0.7005 0.7761
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
5vaf-assembly1.cif.gz_A 1 427 2 508 0.7103 0.7903
5vaf-assembly4.cif.gz_D 1 427 2 509 0.7076 0.7884
6lnw-assembly1.cif.gz_A 1 427 3 492 0.7036 0.7762
5vaf-assembly2.cif.gz_B 1 427 2 515 0.7022 0.7844
6oyc-assembly4.cif.gz_A 1 426 3 498 0.6961 0.7713
7ec7-assembly1.cif.gz_A 1 426 2 496 0.6917 0.7637
5e9t-assembly1.cif.gz_A 1 426 3 503 0.6882 0.7633
5vae-assembly5.cif.gz_E 1 426 3 509 0.6869 0.7693
5vae-assembly5.cif.gz_G 1 426 3 509 0.6862 0.7683
7ec7-assembly2.cif.gz_B 1 426 2 494 0.683 0.7533
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q2FUW3-F1-model_v4 1 427 2 515 0.6988 0.7838
AF-Q9AET5-F1-model_v4 1 427 3 505 0.6928 0.7683
AF-Q9AET9-F1-model_v4 1 426 2 523 0.6919 0.7833
AF-A0A0H2URG7-F1-model_v4 1 426 3 503 0.6903 0.7652
AF-Q3S2Y2-F1-model_v4 1 427 3 506 0.6823 0.7567
AF-A0A0S4NND9-F1-model_v4 1 425 1 441 0.664 0.6991
AF-A1C3M0-F1-model_v4 1 426 1 439 0.6603 0.699
AF-Q3S2Y1-F1-model_v4 1 425 1 442 0.653 0.6959
AF-A0A0H2WWV6-F1-model_v4 1 426 4 493 0.6354 0.7023
AF-A0A0H2UR90-F1-model_v4 1 426 1 445 0.608 0.6484
Download Full SwissProt Results