PROTEIN: ShaoY_2019_ERR3404958_bin.2_k141_3870_38
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Protein File & Metadata
Source:
ShaoY_2019_ERR3404958_bin.2_k141_3870_38.pdb
Genome ID:
Protein ID:
ShaoY_2019_ERR3404958_bin.2_k141_3870_38
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Protein Sequence
MLKIKFENLL VILVLTLIVG YDTLMTTMLN RIIPNLPVVL LICFSLLLCF RFLYIKKFTF 60 FYILTAILLL LTSSIVFMHT GGTNFLLYSL LILLLYDADI DVILKTYVIV SGTIVFGVFL 120 LSILGVIPNL QFAQVRSSGL VIRNSFGFIY PTDFASHCFY LFIAWGYVLR KRFIILRTLV 180 GISLAFFIIK FCDARLNALS VLVATVIFIV MYVTKERKFK IYGILPYFAA IFSFLMFYLS 240 YFFTWSSSLF VSLNNLFSMR LFLGKNAIET YGLHLFGATG VKFIGYGGTT ESVYSYNYVD 300 SSYIQMLFYY GVVPVVLLVL IYVLASKRIY KQGMFLFLAL LSLITINCMI EAFWIRPGYN 360 IFIFTLFASL VPVQYKIKDR IE 382
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A7L9SQD7-F1-model_v4 | GT4 | 1 | 382 | 19 | 398 | 0.6409 |
0.8605 |
| B7AUF6 | GT4 | 1 | 382 | 10 | 815 | 0.6076 |
0.832 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A7L9SQD7 | GT4 | 1 | 382 | 19 | 398 | 0.6409 |
0.8605 |
| B7AUF6 | GT4 | 1 | 382 | 10 | 815 | 0.6076 |
0.832 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.