PROTEIN: ShaoY_2019_ERR3404958_bin.2_k141_1116_28
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Protein File & Metadata
Source:
ShaoY_2019_ERR3404958_bin.2_k141_1116_28.pdb
Genome ID:
Protein ID:
ShaoY_2019_ERR3404958_bin.2_k141_1116_28
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Protein Sequence
MKNSKRFYLY IFIVSVLYAI QYYINNKITP VGDQTAFLKY AEEFQYNYLY FGIDRYFTWS 60 SRLLIESATL LFSVHEKLFV IVSALATFVF LLPSKKFSKE LPWLPGFLIF ICIPASEFLS 120 AGSIPTYVNY ILPASFMLFS LYFRHSSNLL VKIASFVSFV FAVMQEQLAI YAFLWIVFEL 180 IRDWKINSDR NWNILFVVVS SLGILSAKLA PGNTIRFMKN VDSWFPNFIN LNSIQKVGLG 240 ILETGDGLLS VSFAFVTLFL IVSVILSIYK NNFTSFILSI VVLLTILSHK FEWRSILFTL 300 SAVSKLARES GTFEFNFVYL GAVLFYFVIL FILLFIIWSL SDSKDKVWLS YLFIIGLLGR 360 MVISFSPTLY ASDTRTYLPI MLSVFIITCK FINEIYLKIK HRKIN 405
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-Q8KZ91-F1-model_v4 | GT0 | 1 | 405 | 16 | 429 | 0.9029 |
0.9478 |
| AF-I6L8Z7-F1-model_v4 | GT0 | 1 | 405 | 16 | 429 | 0.902 |
0.9469 |
| AF-Q032Y1-F1-model_v4 | GT0 | 1 | 405 | 1 | 406 | 0.8801 |
0.9003 |
| AF-Q032H0-F1-model_v4 | GT0 | 1 | 405 | 6 | 434 | 0.8545 |
0.8974 |
Structural Homologs - CAZyme-ID50
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.