PROTEIN: ShaoY_2019_ERR3404937_bin.4_k141_4652_59
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Protein File & Metadata
Source:
ShaoY_2019_ERR3404937_bin.4_k141_4652_59.pdb
Genome ID:
Protein ID:
ShaoY_2019_ERR3404937_bin.4_k141_4652_59
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Protein Sequence
MDPLELPVSV VLALWAPLPS SRGLALVQGP DGAHEVHDEA TGTASPIEEW LPALGPLTRC 60 AAVLPSAADP LPGLALALDA GEGVLLETAG SPAAPVARLL LVPERSGISV LWRAHLLSVT 120 PPPFDAGQAR REVHRATEEA IESLVELDLA RERPELADTL TDVVTAVLDP RLVPPSLDPR 180 RGELLERSLR LEAICELALE DDGAAATALQ ARRRAEVLRP LLAVARRGVA AATETWPVTG 240 R 241
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P9WLX3-F1-model_v4 | 4 | 240 | 1 | 288 | 0.7387 |
0.8401 |
| AF-Q9CBM3-F1-model_v4 | 4 | 240 | 1 | 298 | 0.7303 |
0.8417 |
| AF-X8FE24-F1-model_v4 | 4 | 241 | 1 | 316 | 0.7146 |
0.8399 |
| AF-K0F1W1-F1-model_v4 | 14 | 239 | 1 | 261 | 0.7106 |
0.8103 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - CAZyme-ID50
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P59980-F1-model_v4 | 4 | 240 | 1 | 288 | 0.7451 |
0.8464 |
| AF-P9WLX2-F1-model_v4 | 4 | 240 | 1 | 288 | 0.7423 |
0.8437 |
| AF-P9WLX3-F1-model_v4 | 4 | 240 | 1 | 288 | 0.7387 |
0.8401 |
| AF-Q9CBM3-F1-model_v4 | 4 | 240 | 1 | 298 | 0.7303 |
0.8417 |
| AF-O07402-F1-model_v4 | 4 | 241 | 1 | 306 | 0.7068 |
0.8217 |