PROTEIN: ShaoY_2019_ERR3404937_bin.4_k141_4519_10
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Protein File & Metadata
Source:
ShaoY_2019_ERR3404937_bin.4_k141_4519_10.pdb
Genome ID:
Protein ID:
ShaoY_2019_ERR3404937_bin.4_k141_4519_10
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Protein Sequence
MDSTDVAATT PETDALNSAI ALRLQLLGVD SPADAGDPVT EKLVSPIIAR QREMGRRLAN 60 RPCAADRRIQ AFLDSYLAEE EVHPRLPGET FVLDQPGLSR ALSIPMDATS FKSPYVESYK 120 IAQGVLHNPR NDRRTTAGVF HVAEGGLPIP DDKKAVPRSV FAKLLELAFQ APDDLMTLPW 180 SANQEEPARC FVSLQLRPIV VPAVPGYTPE RRMELRFITP GGLVSNLDFV EGIFGNGGDP 240 YLPENDASLN PETWTGTTGC VILAPHLDHV TKASLGLPRW EDATERQRRD GMCWKDEGEL 300 YNEGKAFKLV ARDERGVIVT IIADNYFGYG KKEVKTQIGY SANLFGCVEE EHAGGALAYP 360 RYNLGQEYTD ERTPEGLTIE HVLRRNPGVF ELQADGSALK LDDPSIVLVP GGARFSMRTQ 420 TVTWPRTDGT AESSVPLLSD KVYVLPNGYR VHAKHREEDG SQWHLVGTAP WATQAHKPAT 480 VSGGGKSEIS KSLLDAFVYG EAYVNDVEAD LDAVEALLER DYSDRYKDPA RNGKDHRGIL 540 DADRSLGSVI KLFTRSERYT DEHNALIESI PAHVKELLYT VKRYSEPSWG EDWRSHFSVA 600 GINGRHGNSL RLDGEIVKVN MLRVGFEDDG AWRLLSLRPD FSPAAKVQTE DDISASIVVP 660 AGFESTKGSS VSRKFVTNCE SLLFQRPDDA IVRGYDKQTE SDMSKDGLFI SNFQPLTPAD 720 ARTMVADAPG LSRFSKPMQE LVRRAAAVED AEDPSQEYYW VSTANPRLVG GVPTKNPRYL 780 QLRPDIADKR PAALADLTSH LFRDVPLTEP VRHSVDVVAA GRRNNPPEPG VPALCAYNPL 840 HFMELPELFM EFISSMTGKS PSTTGAGSEG ALTKSPFNAL PPVYDLNASL LSYALGGYDG 900 WLSSAGYIGP KVKVAHDISL LIPEIFSRMS EEERDAHNLI EAGYLEKIED FEYEGRTVEA 960 SRLGYRMNGA FANAFFARIF LHPDVVFTEE MLKPELQDPA IFADSVDVIV KTHQVVAKHY 1020 VDDGSIEWAV PPIKALLEIM YSGKSAEGWT LQSPEFRALF ERENILASDW YAARVDAKVE 1080 HDRKQAEAAI SALTRFVETE GNERVSTRLD IEGRLEAARA RLEEVTTPAF REKLVGTLGL 1140 QPVLAEGDPV DGK 1153
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - CAZyme-ID50
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 8e1u-assembly3.cif.gz_C | 8 | 1146 | 1 | 1125 | 0.9646 |
0.9797 |
| 8e1u-assembly3.cif.gz_D-2 | 8 | 1146 | 1 | 1124 | 0.9594 |
0.9753 |
| 8e1u-assembly4.cif.gz_G | 8 | 1146 | 1 | 1115 | 0.9573 |
0.9769 |
| 8e1u-assembly1.cif.gz_F-2 | 8 | 1146 | 1 | 1117 | 0.9459 |
0.9653 |
| 8e1u-assembly1.cif.gz_A | 8 | 1146 | 1 | 1126 | 0.9444 |
0.9603 |
| 6k31-assembly1.cif.gz_A | 12 | 1145 | 1 | 1109 | 0.9428 |
0.9649 |
| 6k31-assembly1.cif.gz_B | 15 | 1145 | 1 | 1108 | 0.9423 |
0.9648 |
| 8e1u-assembly2.cif.gz_H | 8 | 1146 | 1 | 1122 | 0.9414 |
0.959 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A0C5URS1-F1-model_v4 | 8 | 1146 | 1 | 1131 | 0.973 |
0.985 |
| AF-C4LWQ8-F1-model_v4 | 1 | 1148 | 1 | 1151 | 0.9545 |
0.9623 |
| AF-C4M1E4-F1-model_v4 | 1 | 1148 | 1 | 1151 | 0.9537 |
0.9616 |
| AF-C4LY96-F1-model_v4 | 4 | 1148 | 7 | 1149 | 0.9517 |
0.9626 |