PROTEIN: ShaoY_2019_ERR3404937_bin.4_k141_3645_204
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Protein File & Metadata
Source:
ShaoY_2019_ERR3404937_bin.4_k141_3645_204.pdb
Genome ID:
Protein ID:
ShaoY_2019_ERR3404937_bin.4_k141_3645_204
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Protein Sequence
MSFIEDLPAV HHVSAGISAL TVGGRPACVP LEVLRADALR LTTSVFDAYA YAPGGDETLT 60 LGVLTDTLLV RDEALDWVGQ EVLVDVGGAR RFADPETALF DVQWRLNIMG RQVAVIDGPA 120 SPDVPATAEA RLLRRRGLLT TLDTNLSDEF RGVLAPVAQI LGLSSSLHAS RTDTTALDLQ 180 RSPGGDEVGD LSVPTSGLLG AYAIDGALDN LTETDGVRDY VQRVRRVPDR ALAPLIGPAL 240 PTVLGLDPSA DAPGFDRLAT ILGVDRVLWE PMHVLVVAPE DGAARRRADA LIESLGRDVV 300 VRRVDPQTDT MTEDGRELPG IAADHTEWAD VIVLIGVVLA DAPGTAYTST PLVADLSTMD 360 VLGWLMNARR TDSRAVALVE LVKRADRVLV ADDVQRDLVL GTLAGTGRVN DVVYDADPSL 420 TSLVAADPDG VRLEAFCRRP IRAADAGSLS AAEAVALTPR SGDLAIAVQY LREGGVRKVA 480 EKASGRVRRV VAERKGN 497
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A1B2HJI5-F1-model_v4 | GT0 , GT2 | 3 | 449 | 8 | 777 | 0.5716 |
0.791 |
| AF-A0A193C7S6-F1-model_v4 | GT0 , GT2 | 3 | 448 | 9 | 783 | 0.5711 |
0.7959 |
| AF-A4FNM0-F1-model_v4 | GT2 | 3 | 448 | 4 | 775 | 0.5684 |
0.789 |
| AF-A0A6H1RGV9-F1-model_v4 | GT2 | 3 | 449 | 3 | 773 | 0.5672 |
0.7851 |
| AF-A0A286EI38-F1-model_v4 | GT0 , GT2 | 1 | 453 | 7 | 782 | 0.5646 |
0.7754 |
| AF-A0A290ZE16-F1-model_v4 | GT0 , GT2 | 4 | 449 | 1 | 771 | 0.5643 |
0.7805 |
| AF-C7MUX0-F1-model_v4 | GT0 , GT2 | 3 | 448 | 11 | 784 | 0.5637 |
0.7853 |
| AF-A0A0K3BA29-F1-model_v4 | GT0 , GT2 | 3 | 448 | 9 | 778 | 0.5634 |
0.7819 |
| AF-A0A344LGB3-F1-model_v4 | GT0 , GT2 | 3 | 448 | 8 | 782 | 0.5629 |
0.7823 |
| AF-F6FS23-F1-model_v4 | GT0 , GT2 | 2 | 457 | 2 | 786 | 0.5627 |
0.7661 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A4P6EZ85 | GT2 , GT4 | 5 | 457 | 39 | 819 | 0.5168 |
0.7165 |
| A0A346XTX3 | GT0 , GT2 | 1 | 453 | 18 | 793 | 0.4572 |
0.6274 |
| WGD38080.1 | GT2 | 1 | 438 | 1 | 763 | 0.4301 |
0.6054 |
| A0A6N0Y9W6 | GT2 | 4 | 440 | 125 | 814 | 0.4216 |
0.6111 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.