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PROTEIN: ShaoY_2019_ERR3404937_bin.4_k141_3645_200

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Protein File & Metadata
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Source:
ShaoY_2019_ERR3404937_bin.4_k141_3645_200.pdb
Genome ID:
ShaoY_2019_ERR3404937_bin.4
Protein ID:
ShaoY_2019_ERR3404937_bin.4_k141_3645_200

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Detailed structural information will appear here after analysis...

Protein Sequence 
MTTPIATTDV   EQARRRERAL   DTAGVLVPVV   VLVLLTTART   LKLPLFSSAD   EVAHLDYAYQ 60
VWHHRLPDFY   AGIVIDPVRG   SGVPVQWVSQ   HPPLFYLLLA   PVVGPLIDGG   HVLAAGMTAR 120
AVNIALGAAV   VWSVGRAAAS   LFPGRRGLGP   VAALVTACCS   WLMGVSSAVY   NDSLAALAST 180
LMLWATGSTI   LRGPSRRRRV   VVVVAASACL   LSRLSTVAVV   APCLVALVWE   GLASGRDRGR 240
FGRWAGLMTA   LAAGTGVLAT   SGWFYLRNLH   LTGSVTGGHP   EWSQAHLGRR   ELALDQVVTP 300
TALRGLLSVF   DPTGHRSLLG   ALLLVIPAAV   LLMVVATTTV   VRPRRPGRHA   RAGFRVPDLR 360
RPRLQRPGRR   AGVVAVLVTA   TVLVLAMQLA   YSRGGGAISA   RYVLPVILPF   ALSVAGALTS 420
WRLLAPVLVT   AWVVVWARSM   VEWWGALPTS   YDAQTAWPTY   TAASTVLLDT   GLVVLAIGVV 480
LASLSALRGG   GAARAEDTGR 500
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A5K4F436-F1-model_v4 16 445 6 450 0.6331 0.7116
AF-Q8ZP99-F1-model_v4 11 458 10 418 0.633 0.79
AF-Q9HUZ2-F1-model_v4 17 459 4 393 0.6279 0.7903
AF-O06152-F1-model_v4 1 458 38 426 0.6059 0.8165
AF-K0F7B2-F1-model_v4 14 458 6 372 0.5991 0.8091
AF-Q9CC27-F1-model_v4 11 458 20 397 0.5982 0.8072
AF-A0A175VYA5-F1-model_v4 4 462 27 570 0.5923 0.7153
AF-A0A5K4FC45-F1-model_v4 19 459 1 407 0.5892 0.7419
AF-K0F1P6-F1-model_v4 14 458 16 389 0.5872 0.7897
AF-K0EN63-F1-model_v4 22 461 1 529 0.5825 0.6963
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A1S6H5E4-F1-model_v4 GT39 17 451 1 397 0.6951 0.8021
AF-A0A0G4B0Z3-F1-model_v4 GT39 17 451 1 417 0.6875 0.7769
AF-A5GCG9-F1-model_v4 GT39 14 455 3 414 0.6813 0.7624
A0A542FLU6 GT0 8 495 1 468 0.6775 0.9062
AF-A0A858Q705-F1-model_v4 GT39 6 451 12 430 0.675 0.7714
AF-Q605T5-F1-model_v4 GT39 10 451 14 430 0.6745 0.7739
Q605T5 GT39 10 451 14 430 0.6745 0.7739
AF-A0A1L6JG85-F1-model_v4 GT39 13 452 2 399 0.6707 0.7751
AF-A0A7G6Y4J0-F1-model_v4 GT39 15 452 1 390 0.6625 0.7731
AF-A0A1B1UML9-F1-model_v4 GT39 15 450 1 405 0.6615 0.7579
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A1S6H5E4 GT39 17 451 1 397 0.6951 0.8021
D1CEC5 GT39 13 451 13 426 0.6909 0.793
A0A1P8F816 GT39 11 497 11 425 0.6878 0.7804
A0A0G4B0Z3 GT39 17 451 1 417 0.6875 0.7769
A5GCG9 GT39 14 455 3 414 0.6813 0.7624
A0A7D6ESH4 GT39 6 451 1 417 0.6791 0.7664
Q605T5 GT39 10 451 14 430 0.6745 0.7739
QXE90561.1 GT39 15 450 1 390 0.6743 0.7884
A0A6F9WZW7 GT39 16 462 11 408 0.6721 0.7859
A0A0B5BD88 GT39 15 455 1 404 0.6696 0.7796
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
5f15-assembly1.cif.gz_A 16 487 1 403 0.5662 0.7287
7oci-assembly1.cif.gz_F 10 457 1 419 0.5282 0.7045
6s7t-assembly1.cif.gz_A 9 457 1 477 0.522 0.6798
5gmy-assembly1.cif.gz_A 12 457 1 487 0.5053 0.7079
3wak-assembly1.cif.gz_A 12 458 1 504 0.504 0.7106
3waj-assembly1.cif.gz_A 19 457 1 433 0.4798 0.6745
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-O67601-F1-model_v4 21 458 1 341 0.6148 0.8184
AF-Q1MLH5-F1-model_v4 20 457 1 364 0.6094 0.8125
AF-Q1MJ97-F1-model_v4 11 461 1 476 0.606 0.6811
AF-O67270-F1-model_v4 18 486 1 376 0.6006 0.7952
AF-Q48HY9-F1-model_v4 17 458 1 434 0.589 0.7067
AF-Q4ZSZ0-F1-model_v4 17 459 1 436 0.5855 0.7087
AF-Q3KCB9-F1-model_v4 16 483 1 404 0.5839 0.756
AF-Q7N3Q9-F1-model_v4 13 458 1 445 0.581 0.6925
AF-Q4KC80-F1-model_v4 16 484 1 404 0.581 0.7506
AF-B4ETL9-F1-model_v4 13 458 1 445 0.5807 0.6921
Download Full SwissProt Results