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PROTEIN: ShaoY_2019_ERR3404937_bin.4_k141_1721_23

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Protein File & Metadata
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Source:
ShaoY_2019_ERR3404937_bin.4_k141_1721_23.pdb
Genome ID:
ShaoY_2019_ERR3404937_bin.4
Protein ID:
ShaoY_2019_ERR3404937_bin.4_k141_1721_23

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Detailed structural information will appear here after analysis...

Protein Sequence 
MALLTGRKSL   LIYTGRKDGL   GNRVRALLSA   QVLAEREERD   LYYVWSTDKY   FGPAMDDLWE 60
YDGGRSVPRL   LSRALTPVHG   FKQPGPTTVT   DEMRDEHLWQ   IRSHGQPVTW   DQDMRDWTED 120
LRALRPVPRI   ADRINGVFDE   SLRGRPYVAV   QVRSHAVSHA   KTVETSPIEW   FENRMREVRA 180
EFPDVTFYLS   CDTPEAQARL   FAEFDNCVTL   TDKGGYNTVE   GVSSAITDLY   LMGSAQHLIA 240
PAYSSFPNTA   IYLANWAIPF   ERPNEPLEGP   MTLDLPLTPD   PLRPSERG 288
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-F1MAG9-F1-model_v4 9 267 1 272 0.6424 0.7458
AF-A0A0N4UNX9-F1-model_v4 5 268 31 411 0.628 0.8227
AF-Q8VHI3-F1-model_v4 1 285 35 427 0.6279 0.7725
AF-D3ZUN5-F1-model_v4 2 285 38 427 0.6273 0.774
AF-Q9Y2G5-F1-model_v4 1 285 36 427 0.6268 0.7712
AF-A0A0K0DS84-F1-model_v4 5 285 37 420 0.6259 0.7754
AF-A0A044TK33-F1-model_v4 5 268 39 418 0.6252 0.8238
AF-Q8WR51-F1-model_v4 5 285 39 422 0.6246 0.7746
AF-B0S641-F1-model_v4 1 285 50 442 0.6193 0.7716
AF-Q10981-F1-model_v4 5 267 58 334 0.6146 0.7455
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A2U8DUG0-F1-model_v4 GT23 9 266 1 264 0.7966 0.8662
AF-A0A286ITH2-F1-model_v4 GT23 6 263 1 272 0.792 0.8722
UWP49435.1 GT23 7 266 1 268 0.781 0.8521
UMB60795.1 GT0 6 262 2 266 0.7808 0.8561
AF-A0A1Y3ZJ22-F1-model_v4 GT0 7 265 1 276 0.7801 0.8642
AF-A0A2Z4GF53-F1-model_v4 GT23 5 263 1 272 0.7785 0.8564
AF-A6KYR6-F1-model_v4 GT23 7 265 1 276 0.7776 0.8619
AF-A0A854LVJ9-F1-model_v4 GT0 7 265 1 276 0.7774 0.8615
AF-F9D2I8-F1-model_v4 GT0 6 265 2 275 0.7767 0.8562
AF-A0A174SBF6-F1-model_v4 GT0 7 265 1 276 0.776 0.8604
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A2U8DUG0 GT23 9 266 1 264 0.7966 0.8662
A0A286ITH2 GT23 6 263 1 272 0.792 0.8722
UWP49435.1 GT23 7 266 1 268 0.781 0.8521
A0A2Z4GF53 GT23 5 263 1 272 0.7785 0.8564
A0A829SHQ7 GT23 8 262 1 264 0.7725 0.852
A0A5P0Y0D9 GT23 8 264 1 267 0.768 0.8455
UOE50301.1 GT23 9 266 1 270 0.7638 0.8489
A0A3G8XB18 GT23 7 267 1 282 0.7636 0.8519
A0A3R6UZW2 GT23 24 266 1 247 0.7625 0.8506
K9UFJ4 GT23 6 266 6 289 0.7518 0.8459
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
2hlh-assembly1.cif.gz_A 5 285 1 286 0.7103 0.7446
3siw-assembly1.cif.gz_A 5 285 1 290 0.7101 0.7498
2hhc-assembly1.cif.gz_A 5 285 1 291 0.7071 0.7494
2ocx-assembly1.cif.gz_A 5 285 1 292 0.7062 0.7491
3six-assembly1.cif.gz_A 6 285 1 292 0.7047 0.7498
5kxq-assembly2.cif.gz_D 2 266 2 325 0.6449 0.7604
4ap5-assembly1.cif.gz_B 5 285 1 387 0.6443 0.7738
5kxq-assembly1.cif.gz_B 2 266 2 325 0.6434 0.7585
5kxq-assembly1.cif.gz_A 2 266 2 327 0.643 0.7599
4ap6-assembly4.cif.gz_D 5 285 1 387 0.6426 0.7718
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q43966-F1-model_v4 1 288 4 328 0.7198 0.7856
AF-P55355-F1-model_v4 5 287 1 321 0.7123 0.7833
AF-Q45271-F1-model_v4 1 276 43 365 0.6721 0.8024
AF-Q8VHI3-F1-model_v4 1 285 35 427 0.6279 0.7725
AF-Q6EV56-F1-model_v4 2 285 38 427 0.6274 0.7742
AF-Q9Y2G5-F1-model_v4 1 285 36 427 0.6268 0.7712
AF-Q8WR51-F1-model_v4 5 285 39 422 0.6246 0.7746
AF-Q9TTC7-F1-model_v4 5 267 58 334 0.6161 0.7469
AF-Q10983-F1-model_v4 1 267 62 343 0.616 0.7464
AF-O77485-F1-model_v4 5 267 59 334 0.6155 0.7461
Download Full SwissProt Results