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PROTEIN: ShaoY_2019_ERR3404906_bin.10_k141_8030_5

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Protein File & Metadata
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Source:
ShaoY_2019_ERR3404906_bin.10_k141_8030_5.pdb
Genome ID:
ShaoY_2019_ERR3404906_bin.10
Protein ID:
ShaoY_2019_ERR3404906_bin.10_k141_8030_5

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Detailed structural information will appear here after analysis...

Protein Sequence 
MKRVVSLAMV   MILSFSVLTG   CEKTETNTDS   TQADGVNTGT   TAAAAQGAVE   VLFWSAPNQN 60
QFDYWQKKAA   EFNEAGIQHN   GKIIRVSVEM   TPETVSSEAA   IQNAIATGSA   PAASENISLS 120
LMNTLAESGV   ICELQDEAIY   KQIVEDRVMG   NTVDSWELDG   KQYVVPLYIN   SVCLIWNTQA 180
LHALGFQEPP   ETMEEYHQVI   QAYVDHKKEM   EAMGVMAALP   GSNLVSESAY   QCGYDFQMLY 240
STFTQGGEWL   QKDALKVDRD   AMIKTLEFWG   ALGNTNELNK   IESPWTQEKI   SVLFDIGKPW 300
NLESYDKAGK   VYKDDYLFAP   VPVLKKGDSP   YFYADTKGIT   FYKTSNVSEE   IHQSALEFIG 360
WVYNKENAVQ   SDLEWIQATG   MLPVRSDMNE   NSEFNSVFTE   RPALEFFAEN   IPNTVSLPEF 420
TFAGDVEVAF   RTNGLIPYIT   EAINHEALDT   VDASECADRA   IAAMKAAGGF   N 471
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-K0EWS5-F1-model_v4 43 471 21 452 0.759 0.8328
AF-P71619-F1-model_v4 48 471 35 429 0.7307 0.849
AF-A0A133CSA1-F1-model_v4 45 469 25 427 0.7301 0.8255
AF-K0F2E6-F1-model_v4 47 471 42 437 0.7271 0.8483
AF-Q8DNU8-F1-model_v4 13 470 9 438 0.7246 0.7835
AF-K0F1Y0-F1-model_v4 47 471 50 433 0.7214 0.856
AF-K0EWS9-F1-model_v4 1 471 5 463 0.7197 0.7494
AF-K0F002-F1-model_v4 46 469 45 439 0.7137 0.832
AF-A0A133CPC5-F1-model_v4 42 471 27 423 0.7098 0.8115
AF-P9WGU9-F1-model_v4 43 471 27 464 0.7076 0.7868
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A0M1Q963 GH43_11 45 471 40 492 0.6239 0.7251
A0A9Q8PNJ5 GH4 11 471 13 866 0.5941 0.7891
AF-A0A1B0VLS2-F1-model_v4 CBM0 28 471 253 947 0.5488 0.7849
A0A242CSU4 CBM35 28 471 287 978 0.5464 0.7884
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A0M1Q963 GH43_11 45 471 40 492 0.6239 0.7251
A0A9Q8PNJ5 GH4 11 471 13 866 0.5941 0.7891
A0A1Q2TKJ3 GH49 1 470 235 796 0.5572 0.7067
A0A242CSU4 CBM35 28 471 287 978 0.5464 0.7884
A0A7U1BNH7 GH10 42 471 24 734 0.5464 0.7337
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
4gqo-assembly1.cif.gz_A 48 470 1 404 0.8643 0.9389
7bvt-assembly1.cif.gz_A 47 471 1 391 0.79 0.8779
6dtr-assembly1.cif.gz_A 48 471 1 393 0.7822 0.8662
3uor-assembly2.cif.gz_B 49 471 1 389 0.7808 0.8749
7nbz-assembly2.cif.gz_B 47 471 1 385 0.7685 0.8602
1peb-assembly1.cif.gz_A 47 469 3 366 0.7675 0.881
1n3x-assembly1.cif.gz_A 48 469 4 366 0.7669 0.8825
4hs7-assembly2.cif.gz_B 47 471 3 376 0.7653 0.8684
2v93-assembly1.cif.gz_A 49 470 1 366 0.7649 0.8735
7nbz-assembly1.cif.gz_A 48 471 1 377 0.7648 0.8635
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-P76042-F1-model_v4 45 471 25 430 0.7611 0.854
AF-O31518-F1-model_v4 47 471 31 427 0.7318 0.8384
AF-Q8FVS7-F1-model_v4 41 471 18 410 0.721 0.821
AF-Q578M8-F1-model_v4 42 471 18 411 0.7175 0.8157
AF-Q2YKZ9-F1-model_v4 42 471 18 411 0.7153 0.8134
AF-P94528-F1-model_v4 38 471 25 433 0.7151 0.8036
AF-Q9K491-F1-model_v4 45 470 35 423 0.7141 0.8317
AF-Q55471-F1-model_v4 46 470 27 421 0.7137 0.8161
AF-P9WGU8-F1-model_v4 43 471 27 464 0.7078 0.787
AF-P9WGU9-F1-model_v4 43 471 27 464 0.7076 0.7868
Download Full SwissProt Results