PROTEIN: ShaoY_2019_ERR3404835_bin.5_k141_662_12
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Protein File & Metadata
Source:
ShaoY_2019_ERR3404835_bin.5_k141_662_12.pdb
Genome ID:
Protein ID:
ShaoY_2019_ERR3404835_bin.5_k141_662_12
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Protein Sequence
MINLFDNYTT ESRDLHIAML MSDHRQETVV INDDGYLPDD VVSPLMYFFK HAGAKFEGHP 60 RYFNQIDLPR FWEIEASAQE GKIMDKGIQR GRITYNRTDN ERQVKTVEWF DRQGKTRVID 120 RYNQWGWKFA ITTLDEEGNY AITTYLTPDG FEVLVENHFT GDIIYNHNPQ GDFSIFKNRT 180 EMVKYYLEHA DLTVDRIMYN TLADGFQVTE SMASTTHDNI LFWQEPITDS VPGNMAYLLS 240 QEDANTKVVV QHREAYERLM TLLPADQQAK VTYLGFIYPF RRQNQQRPTA VTFTNSDQME 300 QLEALVKTLP QVTFNVGALT EMSTKLLNFD QYDNVNLYPQ ILQTDVDRLV QEADLYLDIN 360 HGNEILDASR TAFENNMLIL GFDQTVHNRR FTAPEHIYQP EKVEDMITLV NTVLGDGNAL 420 EDQLQAQWHH AGEETVEHYN QVIG 444
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q2FUW8-F1-model_v4 | 1 | 444 | 1 | 447 | 0.9321 |
0.9493 |
| AF-Q2FUW3-F1-model_v4 | 1 | 444 | 2 | 511 | 0.5789 |
0.6417 |
| AF-Q2G0L2-F1-model_v4 | 1 | 444 | 1 | 494 | 0.5556 |
0.6095 |
| AF-Q2G0L3-F1-model_v4 | 1 | 444 | 1 | 490 | 0.552 |
0.6005 |
| AF-O05083-F1-model_v4 | 1 | 444 | 3 | 351 | 0.5492 |
0.6365 |
| AF-Q2FUW7-F1-model_v4 | 1 | 444 | 2 | 497 | 0.5413 |
0.5956 |
| AF-Q5FAD9-F1-model_v4 | 1 | 444 | 2 | 349 | 0.5329 |
0.6214 |
| AF-Q2G255-F1-model_v4 | 1 | 444 | 2 | 368 | 0.5169 |
0.594 |
| AF-Q9HUG1-F1-model_v4 | 1 | 444 | 9 | 373 | 0.5161 |
0.5934 |
| AF-A0A0N4UFD9-F1-model_v4 | 1 | 444 | 3 | 397 | 0.5152 |
0.5702 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A0R1V511 | GT8 | 1 | 444 | 1 | 444 | 0.9964 |
0.9993 |
| AF-A0A385XML0-F1-model_v4 | GT8 | 1 | 443 | 1 | 439 | 0.9678 |
0.9793 |
| AF-A0A1Y0FAB7-F1-model_v4 | GT8 | 1 | 444 | 1 | 441 | 0.9671 |
0.9766 |
| AF-A0A1D7TQ49-F1-model_v4 | GT8 | 1 | 444 | 1 | 440 | 0.9658 |
0.9777 |
| AF-A0A239X8E7-F1-model_v4 | GT8 | 1 | 444 | 1 | 440 | 0.9648 |
0.9757 |
| AF-A0A345VKT4-F1-model_v4 | GT8 | 1 | 444 | 1 | 439 | 0.9622 |
0.9763 |
| AF-A0A6H1NVD5-F1-model_v4 | GT8 | 1 | 444 | 1 | 446 | 0.9617 |
0.9731 |
| AF-A0A089QAW1-F1-model_v4 | GT8 | 1 | 444 | 3 | 442 | 0.9615 |
0.9758 |
| AF-A0A2L0D4W5-F1-model_v4 | GT8 | 1 | 444 | 1 | 439 | 0.9611 |
0.9754 |
| AF-Q8DYM9-F1-model_v4 | GT8 | 1 | 444 | 1 | 441 | 0.9606 |
0.9715 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A0R1V511 | GT8 | 1 | 444 | 1 | 444 | 0.9964 |
0.9993 |
| A0A6L8MZD6 | GT8 | 1 | 444 | 1 | 437 | 0.9624 |
0.9806 |
| A0A089QAW1 | GT8 | 1 | 444 | 3 | 442 | 0.9615 |
0.9758 |
| A0A7L6BH62 | GT8 | 1 | 444 | 1 | 446 | 0.9606 |
0.9756 |
| A0A428GIL4 | GT8 | 1 | 443 | 1 | 442 | 0.9605 |
0.9697 |
| J3AIZ9 | GT8 | 1 | 444 | 1 | 439 | 0.9601 |
0.9747 |
| A0A380JYR0 | GT8 | 1 | 444 | 1 | 440 | 0.9596 |
0.9736 |
| A0A7D7G947 | GT8 | 1 | 444 | 1 | 437 | 0.9571 |
0.9725 |
| A0A3S6QT94 | GT8 | 1 | 444 | 1 | 439 | 0.9567 |
0.9706 |
| A0A9P1S375 | GT8 | 1 | 444 | 1 | 442 | 0.954 |
0.9637 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5e9u-assembly2.cif.gz_H | 1 | 444 | 1 | 442 | 0.9312 |
0.9474 |
| 6oyc-assembly4.cif.gz_A | 1 | 444 | 2 | 496 | 0.645 |
0.7052 |
| 5vae-assembly5.cif.gz_E | 1 | 444 | 1 | 504 | 0.6391 |
0.7048 |
| 5vae-assembly5.cif.gz_G | 1 | 444 | 1 | 506 | 0.6378 |
0.7036 |
| 6lnw-assembly1.cif.gz_A | 1 | 444 | 1 | 488 | 0.6361 |
0.694 |
| 5vae-assembly1.cif.gz_A | 1 | 444 | 1 | 505 | 0.6327 |
0.7022 |
| 7ec7-assembly1.cif.gz_A | 1 | 444 | 1 | 494 | 0.5807 |
0.6366 |
| 7ec7-assembly2.cif.gz_B | 1 | 444 | 1 | 492 | 0.5713 |
0.6256 |
| 5vaf-assembly4.cif.gz_D | 1 | 444 | 1 | 505 | 0.5585 |
0.6174 |
| 5vaf-assembly1.cif.gz_A | 1 | 444 | 1 | 504 | 0.5547 |
0.6133 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q79T00-F1-model_v4 | 1 | 444 | 1 | 442 | 0.953 |
0.9705 |
| AF-A0A0H2UR90-F1-model_v4 | 1 | 444 | 1 | 440 | 0.9482 |
0.9661 |
| AF-A0A0S4NND9-F1-model_v4 | 1 | 444 | 1 | 437 | 0.9172 |
0.9403 |
| AF-Q3S2Y1-F1-model_v4 | 1 | 444 | 1 | 437 | 0.9157 |
0.9408 |
| AF-A1C3M0-F1-model_v4 | 1 | 444 | 1 | 435 | 0.9079 |
0.9346 |
| AF-Q9AET9-F1-model_v4 | 1 | 444 | 1 | 517 | 0.6262 |
0.6984 |
| AF-Q2FUW3-F1-model_v4 | 1 | 444 | 2 | 511 | 0.5789 |
0.6417 |
| AF-A0A0H2WWV6-F1-model_v4 | 1 | 444 | 3 | 492 | 0.5648 |
0.6167 |
| AF-O05083-F1-model_v4 | 1 | 444 | 3 | 351 | 0.5492 |
0.6365 |
| AF-A0A0H2URG7-F1-model_v4 | 1 | 444 | 2 | 498 | 0.5447 |
0.6002 |