PROTEIN: ShaoY_2019_ERR3404835_bin.5_k141_4482_89
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Protein File & Metadata
Source:
ShaoY_2019_ERR3404835_bin.5_k141_4482_89.pdb
Genome ID:
Protein ID:
ShaoY_2019_ERR3404835_bin.5_k141_4482_89
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Protein Sequence
MKEKIGKFWN TPITGSQLYF IVFVLFLFHK FVDTTTIDYQ PLISTLHLVS YLVIPAMLFK 60 IYFMDHYKLD KLLWISVAIA IFLISYLKTR EITILSYFLM IVGAKGVDFR KIIQWFFYLS 120 VSFLIIIVVF TLLGVITNLI YRPIGRSIRY SLGIVYPTDF AAHVLFSILA YYYLRFGKIK 180 WIEHIIVIAI GILVMKITNA RLDSLTIFLS VPITIIAQLS IKYHELSLVT AFMWIVTPVL 240 EWVAVVSSYF YTPKIGILKS IDDALSGRLF YSHIAFEKYP ITIFGQKVIE HGNGGQNGMK 300 VFNNTGPHSY FYIDSSYLRM FIIFGLLVFF IVSVIMIATS IKGYLNHDYI IPAIILIVSI 360 ASLVEQHLWE IAYDPFLIYL VASIPLKEKE NELQFKEYLS SSN 403
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A7L9SQD7-F1-model_v4 | GT4 | 13 | 386 | 23 | 391 | 0.6237 |
0.8888 |
| B7AUF6 | GT4 | 3 | 403 | 7 | 479 | 0.6202 |
0.8381 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A7L9SQD7 | GT4 | 13 | 386 | 23 | 391 | 0.6237 |
0.8888 |
| B7AUF6 | GT4 | 3 | 403 | 7 | 479 | 0.6202 |
0.8381 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.