PROTEIN: ShaoY_2019_ERR3404829_bin.1_k141_479_15
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Protein File & Metadata
Source:
ShaoY_2019_ERR3404829_bin.1_k141_479_15.pdb
Genome ID:
Protein ID:
ShaoY_2019_ERR3404829_bin.1_k141_479_15
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Protein Sequence
MTDLTQIPVP NEGPITDKIK EIYERSFPPE EQIPLPELLT STQLDEVSFL AWIDPSLPAG 60 EDGAGNVVAL TFSLVFPDLF YLGFLAVDGR TRSAGYGTRI LTHFRERYGD IPQLLEIEPV 120 VREAGNYQQR VRRLAFYERN GFTVTNMLTH EADQTYRVLA RDGIVSPQRL EEALNSVTDD 180 PAYASRVTTD 190
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A0H3GQS1-F1-model_v4 | 3 | 184 | 1 | 175 | 0.811 |
0.8652 |
| AF-Q9HVB7-F1-model_v4 | 2 | 163 | 4 | 148 | 0.6955 |
0.8269 |
| AF-P44305-F1-model_v4 | 2 | 163 | 1 | 146 | 0.6927 |
0.8093 |
| AF-P0A944-F1-model_v4 | 3 | 163 | 2 | 146 | 0.6914 |
0.8174 |
| AF-Q8ZJW4-F1-model_v4 | 2 | 163 | 1 | 146 | 0.6889 |
0.8099 |
| AF-A0A0H3GHX5-F1-model_v4 | 3 | 163 | 2 | 146 | 0.6871 |
0.8131 |
| AF-K0EU36-F1-model_v4 | 2 | 163 | 12 | 164 | 0.6709 |
0.798 |
| AF-Q58QH5-F1-model_v4 | 3 | 163 | 5 | 165 | 0.6669 |
0.756 |
| AF-Q2G0U6-F1-model_v4 | 1 | 163 | 4 | 160 | 0.6562 |
0.7545 |
| AF-Q55G01-F1-model_v4 | 2 | 164 | 2 | 187 | 0.6549 |
0.7801 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| WCJ58883.1 | GT0 | 1 | 163 | 345 | 500 | 0.4407 |
0.7756 |
| AF-W8F3T3-F1-model_v4 | GT0 | 1 | 164 | 304 | 459 | 0.438 |
0.7516 |
| AF-A0A1D8U245-F1-model_v4 | GT0 | 1 | 163 | 345 | 505 | 0.4378 |
0.751 |
| AF-A0A6H1U2R0-F1-model_v4 | GT0 | 1 | 164 | 38 | 504 | 0.4323 |
0.7314 |
| AF-A0A2I7SH37-F1-model_v4 | GT0 | 1 | 163 | 348 | 499 | 0.4266 |
0.7667 |
| BDQ33002.1 | GT0 | 1 | 163 | 335 | 484 | 0.4188 |
0.7548 |
Structural Homologs - CAZyme-ID50
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 3ey5-assembly1.cif.gz_A | 2 | 186 | 1 | 176 | 0.7788 |
0.836 |
| 3exn-assembly1.cif.gz_A | 2 | 163 | 4 | 154 | 0.6877 |
0.7969 |
| 2cnt-assembly4.cif.gz_D | 2 | 163 | 1 | 146 | 0.6774 |
0.8033 |
| 5isv-assembly2.cif.gz_B | 3 | 163 | 2 | 146 | 0.6738 |
0.8142 |
| 8osp-assembly2.cif.gz_C | 2 | 163 | 5 | 174 | 0.6738 |
0.7754 |
| 6ygd-assembly1.cif.gz_A | 2 | 164 | 3 | 159 | 0.6699 |
0.7673 |
| 1tiq-assembly2.cif.gz_B | 2 | 163 | 1 | 162 | 0.6684 |
0.7588 |
| 3ne7-assembly1.cif.gz_A | 3 | 163 | 3 | 159 | 0.6648 |
0.7565 |
| 1yvk-assembly1.cif.gz_D | 2 | 163 | 1 | 151 | 0.6538 |
0.756 |
| 6ao7-assembly1.cif.gz_A-2 | 1 | 163 | 2 | 153 | 0.6517 |
0.7506 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-O31601-F1-model_v4 | 17 | 190 | 1 | 179 | 0.7262 |
0.8155 |
| AF-P44305-F1-model_v4 | 2 | 163 | 1 | 146 | 0.6927 |
0.8093 |
| AF-P0A947-F1-model_v4 | 3 | 163 | 2 | 146 | 0.6921 |
0.8181 |
| AF-P0A946-F1-model_v4 | 3 | 163 | 2 | 146 | 0.6917 |
0.8176 |
| AF-P0A944-F1-model_v4 | 3 | 163 | 2 | 146 | 0.6914 |
0.8174 |
| AF-P0A945-F1-model_v4 | 3 | 163 | 2 | 146 | 0.6912 |
0.8171 |
| AF-Q8ZJW4-F1-model_v4 | 2 | 163 | 1 | 146 | 0.6889 |
0.8099 |
| AF-Q9HL57-F1-model_v4 | 2 | 164 | 2 | 160 | 0.6621 |
0.7495 |
| AF-Q54R69-F1-model_v4 | 1 | 182 | 204 | 441 | 0.5013 |
0.7401 |