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PROTEIN: ShaoY_2019_ERR3404781_bin.7_k141_3027_35

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Protein File & Metadata
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Source:
ShaoY_2019_ERR3404781_bin.7_k141_3027_35.pdb
Genome ID:
ShaoY_2019_ERR3404781_bin.7
Protein ID:
ShaoY_2019_ERR3404781_bin.7_k141_3027_35

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Detailed structural information will appear here after analysis...

Protein Sequence 
MEIDIKKFDL   LCDKGSGIYN   EDMVGLCKKG   AWVLDGATGL   NNKNLISKES   DAKWYVSWWN 60
KYLQENIGKD   KSLKEIVLEG   LENVKKEYLL   KLNGLKIENL   DAPSASAIII   KLYEDKLEYL 120
LLGDCTLFLN   KLNENMIIKD   ERVCKLDEKV   FSRMEKLNKR   GNLTILEKKN   ILLPFIIENR 180
LKKNNDKGYW   ILEFNKEAVE   KSIHGYMDVE   GEVKIMMSSD   GFSCAWDRYN   IFKENEMIKI 240
GQHKGIEYVK   EKIRKLEKED   NNGMIFPRFK   ESDDSSCVYL   HITKK 285
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q9I649-F1-model_v4 2 285 1 285 0.9136 0.9326
AF-Q9I757-F1-model_v4 1 283 5 242 0.6931 0.7829
AF-Q9I355-F1-model_v4 1 282 1 242 0.693 0.7722
AF-O25181-F1-model_v4 3 284 1 224 0.6827 0.7885
AF-K0F3J0-F1-model_v4 2 285 16 245 0.6799 0.7956
AF-A0A133CPV9-F1-model_v4 5 285 1 244 0.6751 0.7522
AF-Q8DNR9-F1-model_v4 5 285 1 246 0.6728 0.7422
AF-Q32EH8-F1-model_v4 4 284 1 253 0.6724 0.7307
AF-P76395-F1-model_v4 4 285 1 253 0.672 0.7304
AF-Q2FZ65-F1-model_v4 4 285 1 246 0.6702 0.7421
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A4V1YV66 CE6 2 284 551 829 0.5327 0.8151
AF-A0A0P0GJY3-F1-model_v4 CE6 2 283 552 829 0.5311 0.8148
AF-A0A0S2HXR9-F1-model_v4 CBM50 1 285 4 252 0.5212 0.73
A0A2K2F1L8 CBM50 1 285 2 265 0.4867 0.6412
AF-A0A1B1YBC7-F1-model_v4 CBM50 1 285 2 278 0.4837 0.6133
AF-A0A3P6CYK6-F1-model_v4 GT4 4 285 79 343 0.4831 0.6929
AF-A0A1B1YIK0-F1-model_v4 CBM50 1 285 2 278 0.4823 0.6113
AF-A0A4V6EP87-F1-model_v4 CBM50 1 285 2 269 0.469 0.6375
A5ACJ8 GT31 1 285 804 1078 0.3963 0.6577
A0A7R9BGF2 GT0 3 285 803 1073 0.3949 0.7013
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A4V1YV66 CE6 2 284 551 829 0.5327 0.8151
A0A0S2HXR9 CBM50 1 285 4 252 0.5212 0.73
A0A2K2F1L8 CBM50 1 285 2 265 0.4867 0.6412
A0A3P6CYK6 GT4 4 285 79 343 0.4831 0.6929
A0A1B1YIK0 CBM50 1 285 2 278 0.4823 0.6113
A5ACJ8 GT31 1 285 804 1078 0.3963 0.6577
A0A1B1ZJA0 CBM50 7 285 1713 1953 0.3162 0.6826
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
6jkv-assembly2.cif.gz_B 1 283 2 227 0.7131 0.8177
6jkv-assembly1.cif.gz_A 1 283 2 230 0.7091 0.809
1txo-assembly1.cif.gz_A 3 285 1 235 0.7083 0.7959
2cm1-assembly1.cif.gz_A 2 285 1 230 0.7057 0.8001
2jfs-assembly1.cif.gz_A 3 283 1 232 0.6922 0.7826
2j82-assembly1.cif.gz_A-2 6 282 1 221 0.691 0.7969
2y09-assembly1.cif.gz_A 6 282 1 236 0.6892 0.7734
5d2u-assembly1.cif.gz_A 6 282 1 240 0.6891 0.7681
2j86-assembly1.cif.gz_A 6 282 1 235 0.6886 0.7747
2j86-assembly2.cif.gz_B 6 282 1 236 0.6883 0.7727
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q71YJ5-F1-model_v4 5 285 1 246 0.6843 0.763
AF-Q8Y678-F1-model_v4 5 285 1 247 0.6817 0.7576
AF-Q92AI7-F1-model_v4 5 285 1 245 0.6815 0.7626
AF-A0AJS6-F1-model_v4 5 285 1 246 0.6798 0.7581
AF-P17906-F1-model_v4 3 283 7 199 0.6798 0.8398
AF-O34779-F1-model_v4 5 285 1 246 0.6757 0.7559
AF-Q8DNR9-F1-model_v4 5 285 1 246 0.6728 0.7422
AF-Q8KY51-F1-model_v4 5 285 1 246 0.6727 0.7418
AF-P76395-F1-model_v4 4 285 1 253 0.672 0.7304
AF-P47354-F1-model_v4 4 285 5 259 0.6716 0.7348
Download Full SwissProt Results