PROTEIN: Rep_988_c_11_49
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Protein File & Metadata
Source:
Rep_988_c_11_49.pdb
Genome ID:
Protein ID:
Rep_988_c_11_49
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Protein Sequence
MSRSIRICSY LLLPLIYLLV NVKIAQLGES FPITIVTFLP VLLLLYVDKI NLKKLMIALG 60 LGTGLTLFNY IFGQSLDASK YVTSTMLFVY IVIIIGMVWS IRFKTISPHN YRKILRFFYI 120 AVALIVMLAA LEMAQIILTG GSSLMEIISK YLIYSNSYVL NFIKFGGKRT TALYFEPAFF 180 ALALISIWLS IKQFGIKTPK TDAMILAGIV LSGSFSGVMT FILFYLLEWA FQYLNKDAIK 240 KKLPLAIISL TVFMVGVIFA FPYISERLGD LGKEGSSSYY RIIGPLVMVG YSLTHIDGVV 300 RFGSLYEYVA SFGIFNGADV GKTIDNGLYL LIIYFSWFAV LLTLWYLFKV FKMMINAFGD 360 NQNFRVQLYL FTPVSLFFTG SIFSPEYAFL IVCPFILRKA LNITNV 406
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P71238-F1-model_v4 | 1 | 405 | 1 | 405 | 0.986 |
0.9913 |
| AF-H9L488-F1-model_v4 | 1 | 405 | 1 | 404 | 0.9847 |
0.9913 |
| AF-Q2G288-F1-model_v4 | 1 | 406 | 2 | 407 | 0.6981 |
0.7301 |
| AF-Q9I1M9-F1-model_v4 | 5 | 406 | 42 | 456 | 0.6714 |
0.7521 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A517MXC4-F1-model_v4 | GT26 | 1 | 406 | 17 | 445 | 0.5565 |
0.7294 |
| UII34295.1 | GT4 | 1 | 406 | 8 | 416 | 0.5506 |
0.731 |
| AF-E6U9X7-F1-model_v4 | GT0 | 1 | 406 | 2 | 493 | 0.5456 |
0.7286 |
| AF-A0A386XPQ4-F1-model_v4 | GT0 | 1 | 406 | 29 | 449 | 0.5398 |
0.7285 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A517MXC4 | GT26 | 1 | 406 | 17 | 445 | 0.5565 |
0.7294 |
| UII34295.1 | GT4 | 1 | 406 | 8 | 416 | 0.5506 |
0.731 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P71238-F1-model_v4 | 1 | 405 | 1 | 405 | 0.986 |
0.9913 |
| AF-O32270-F1-model_v4 | 2 | 406 | 3 | 480 | 0.6434 |
0.7201 |
| AF-Q00474-F1-model_v4 | 26 | 403 | 1 | 392 | 0.6313 |
0.6942 |