PROTEIN: Rep_98_c_23_4
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Protein File & Metadata
Source:
Rep_98_c_23_4.pdb
Genome ID:
Protein ID:
Rep_98_c_23_4
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Protein Sequence
MRDTKHGREQ RRQACSSVNG VWAPYVATLL WAVVCGCGYA FWAKRAGVWA MDSWLDFFRF 60 QTPLYLFWTI GFVIMFAAPL RFTKYFSDFT KKKRGVSSSK SLEADSENPY SSQTARDGLS 120 AKFIETNREK LCSEKMHRCG TDAVSYAVML LWAMGYANLL IGFFNSLLGT CLFFLLGFIL 180 HGYSQARKGI KPSFSPRLFI IATILYVAYE ALTLCWSPHL VRSEEYFRRE LWLAVVPIAL 240 FCYPPERQLV RGFMEYALRI TMLYLSSVLL LYLWLCSANG ISSFACFTLS KLYLPLPWGK 300 SSPVTLLSLF GWQHYTYLCV IFTMPFLYYA VRTPLRSAKG TVLILLYVEM LAFTIIMQSR 360 ICMLFLCALG VVLLIKASTR MSVFKVVIGG LIVACLVVLV LAIAFPDLLG YFTDEHRRAL 420 LRIGKSYIGE HPWRGFGLAS SEELIRPFMQ GYNAGHFHNQ WMQSYLEGGI VSAVLITIVP 480 LSYIAIALRR RCADALLAGL FFILILLIEL VFIFPEYLIG MMIMLCFLIE KRTKCLSTRE 540 EIWL 544
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-Q51524-F1-model_v4 | GT0 | 135 | 534 | 4 | 400 | 0.5573 |
0.7027 |
| UII34295.1 | GT4 | 138 | 540 | 9 | 422 | 0.4915 |
0.7705 |
| AF-A0A0C5WHY3-F1-model_v4 | GT4 | 138 | 543 | 1 | 746 | 0.4868 |
0.7462 |
| AF-A0A517MXC4-F1-model_v4 | GT26 | 69 | 537 | 8 | 448 | 0.4863 |
0.6872 |
| AF-H8L3P3-F1-model_v4 | GT2 | 87 | 544 | 3 | 714 | 0.4744 |
0.6458 |
| AF-D5MJ04-F1-model_v4 | GT9 | 142 | 543 | 23 | 566 | 0.4735 |
0.7393 |
| AF-R4KL74-F1-model_v4 | GT4 | 69 | 544 | 36 | 859 | 0.4551 |
0.6335 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| Q4JZZ9 | GT4 | 23 | 535 | 1 | 406 | 0.5958 |
0.6976 |
| UII34295.1 | GT4 | 138 | 540 | 9 | 422 | 0.4915 |
0.7705 |
| A0A0C5WHY3 | GT4 | 138 | 543 | 1 | 746 | 0.4868 |
0.7462 |
| A0A517MXC4 | GT26 | 69 | 537 | 8 | 448 | 0.4863 |
0.6872 |
| H8L3P3 | GT2 | 87 | 544 | 3 | 714 | 0.4744 |
0.6458 |
| D5MJ04 | GT9 | 142 | 543 | 23 | 566 | 0.4735 |
0.7393 |
| R4KL74 | GT4 | 69 | 544 | 36 | 859 | 0.4551 |
0.6335 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.