PROTEIN: Rep_960_c_173_43
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Protein File & Metadata
Source:
Rep_960_c_173_43.pdb
Genome ID:
Protein ID:
Rep_960_c_173_43
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Protein Sequence
MPEKTLSRRT FLTASSALAV LPVLHSPFAR AVASRKTVNI QDYNAKDWIA SFRQAFSDAE 60 TVVVPAGLVC ENINTGIFIP PGKTLHVLGR LSGNGRGRFV LQEGCQVTGE KGGSLHNITL 120 DVRGSDCAIT DLTMSGFGPV TQIYIGGIKP RVMRNLVIDN LTVTQANYAI LRQGFHNQVD 180 GARITHCRFS DLQGDAIEWN VAINDRNILI SDHVIERINC TNGKINWGIG IGLAGSTYDN 240 TYPEQQTVKN FVVANITGSD CRQLVHVENG KHFVIRNVKA KNITPDFSKK AGIDNATVAI 300 YGCDNFVIDN VDMVNSAGML IGYGVVKGKY LSIPQNFKLN HISLDNTQLE YKLRGIQISS 360 GNATSFVALT NIEMKRATLE LHNQPQHLFL RNIRVMQASA IGPALKMHFD LRKDVRGKFM 420 AKEDTLLSLA NVHAVNEKGQ SSVDIDRINH HVVNVDAINF RLPEGRG 467
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P71244-F1-model_v4 | 31 | 467 | 28 | 464 | 0.9323 |
0.996 |
| AF-P26389-F1-model_v4 | 31 | 467 | 31 | 467 | 0.9244 |
0.9914 |
| AF-Q38958-F1-model_v4 | 3 | 452 | 16 | 452 | 0.599 |
0.6535 |
| AF-A0A0R0JWQ5-F1-model_v4 | 32 | 452 | 36 | 427 | 0.5934 |
0.6926 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A3E4KXH3 | GH28 | 30 | 462 | 23 | 509 | 0.6988 |
0.7939 |
| AF-A7Z993-F1-model_v4 | PL9_2 | 32 | 460 | 28 | 443 | 0.6347 |
0.7214 |
| WHY51124.1 | PL0 | 40 | 459 | 19 | 387 | 0.6315 |
0.7644 |
| A0A8G1A3B1 | CBM6 | 28 | 467 | 17 | 446 | 0.5047 |
0.7657 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A3E4KXH3 | GH28 | 30 | 462 | 23 | 509 | 0.6988 |
0.7939 |
| UYQ60140.1 | GH136 | 26 | 460 | 37 | 492 | 0.6604 |
0.7798 |
| UAY56939.1 | PL9_2 | 29 | 460 | 31 | 463 | 0.6072 |
0.7003 |
| A0A8J8SGA7 | GH136 | 28 | 464 | 32 | 463 | 0.5551 |
0.7221 |
| A0A2L0UC88 | PL31 | 10 | 430 | 67 | 462 | 0.5238 |
0.6195 |
| A0A8G1A3B1 | CBM6 | 28 | 467 | 17 | 446 | 0.5047 |
0.7657 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 6e0v-assembly1.cif.gz_A | 33 | 467 | 27 | 458 | 0.738 |
0.9023 |
| 4urr-assembly1.cif.gz_A | 33 | 465 | 41 | 466 | 0.6394 |
0.739 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P71244-F1-model_v4 | 31 | 467 | 28 | 464 | 0.9323 |
0.996 |
| AF-P37775-F1-model_v4 | 31 | 467 | 28 | 464 | 0.9282 |
0.9922 |
| AF-P26389-F1-model_v4 | 31 | 467 | 31 | 467 | 0.9244 |
0.9914 |