PROTEIN: Rep_960_c_173_30
Loading protein structure...
Loading protein structure...
Protein File & Metadata
Source:
Rep_960_c_173_30.pdb
Genome ID:
Protein ID:
Rep_960_c_173_30
Loading protein structure information...
Detailed structural information will appear here after analysis...
Protein Sequence
MSRSIRICSY LLLPLIYLLV NVKIAQLGES FPITIVTFLP VLLLLYVERI SIKKLMIALG 60 IGAGLTAFNY LFGQSLDASK YVTSTMLFVY IVIIIGMVWS IRFKTISPHN YRKILRFFYL 120 VVALVVVLAA AEMAQIILTG GSSLMESISK YLIYSNSYVL NFIKFGGKRT TALYFEPAFF 180 ALALISIWLS IKQFGIKTPK TDAMILAGII LSGSFSGVMT FILFYLLEWA FQYLNKDAIK 240 KKLPLAIISL AVFLVGVIFA FPYISTRLGD LGTEGSSSYY RIVGPLVMVG YSLTHIDGVV 300 RFGSLYEYVA SFGIFNGADV GKTIDNGLYL LIIYFSWFAV LMTLWYMWKI LKMTLNAFGD 360 NRNFRVQLYL FTPVSLFFTG SIFSPEYAFL IVCPFILRKA LNMTKV 406
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P71238-F1-model_v4 | 1 | 406 | 1 | 405 | 0.9934 |
0.9981 |
| AF-H9L488-F1-model_v4 | 1 | 405 | 1 | 404 | 0.9914 |
0.9973 |
| AF-Q2G288-F1-model_v4 | 4 | 406 | 5 | 407 | 0.6911 |
0.7275 |
| AF-Q9I1M9-F1-model_v4 | 4 | 406 | 39 | 453 | 0.6672 |
0.7468 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A517MXC4-F1-model_v4 | GT26 | 2 | 406 | 15 | 445 | 0.5499 |
0.722 |
| UII34295.1 | GT4 | 1 | 406 | 7 | 419 | 0.5481 |
0.7276 |
| AF-A0A386XPQ4-F1-model_v4 | GT0 | 1 | 406 | 2 | 449 | 0.5349 |
0.7219 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A517MXC4 | GT26 | 2 | 406 | 15 | 445 | 0.5499 |
0.722 |
| UII34295.1 | GT4 | 1 | 406 | 7 | 419 | 0.5481 |
0.7276 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P71238-F1-model_v4 | 1 | 406 | 1 | 405 | 0.9934 |
0.9981 |