PROTEIN: Rep_954_c_14_9
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Protein File & Metadata
Source:
Rep_954_c_14_9.pdb
Genome ID:
Protein ID:
Rep_954_c_14_9
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Protein Sequence
MSRSIRVCSY LLLPLIYLLV NVKLLQLGES FPITVVTFLP VLLLLYVARI NLKKLMIALG 60 IGAGLTAFNY IFGQSLDASK YVTSTMLFVY IVIIIGMTWS IRFKTLSVRN YRKVLRLFYL 120 VIGIIVAIAC AEMAQIILTG GSSLMEAISK YLIYSNSYVM NFIKFGGRRT TALYFEPAFF 180 ALALISIWLC IKQFGVKTPK ADAMILLGII LSGSFSGVMT FILFYLLEWA FKYLNKNALR 240 KKLPLAIISL GVFLVGLVFA FPYIATRLGD LGTEGSSSYY RIIGPLVMVG YSLIHIDGVV 300 RFGSLYEYVA SFGIFNGADV GKTIDNGLYL LIIYFSWLAI ILSGWYLWKV VKMMAHAFGD 360 NPNFRVQLWL FTPISLFFTG SIFSPEYAFL IVCPFILRKA IGQPDSRS 408
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P71238-F1-model_v4 | 1 | 406 | 1 | 405 | 0.9755 |
0.9843 |
| AF-H9L488-F1-model_v4 | 1 | 404 | 1 | 404 | 0.9742 |
0.9841 |
| AF-Q2G288-F1-model_v4 | 1 | 408 | 2 | 410 | 0.6966 |
0.7271 |
| AF-Q9I1M9-F1-model_v4 | 5 | 408 | 42 | 455 | 0.6712 |
0.7514 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-B8DZR6-F1-model_v4 | GT9 | 2 | 408 | 39 | 475 | 0.5653 |
0.7503 |
| AF-A0A517MXC4-F1-model_v4 | GT26 | 3 | 408 | 21 | 451 | 0.5592 |
0.7346 |
| UII34295.1 | GT4 | 1 | 408 | 9 | 422 | 0.5495 |
0.7283 |
| AF-E6U9X7-F1-model_v4 | GT0 | 1 | 408 | 2 | 426 | 0.5432 |
0.7243 |
| AF-A0A386XPQ4-F1-model_v4 | GT0 | 1 | 408 | 29 | 453 | 0.5382 |
0.7251 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| B5YD26 | GT9 | 2 | 408 | 39 | 584 | 0.5676 |
0.7534 |
| A0A517MXC4 | GT26 | 3 | 408 | 21 | 451 | 0.5592 |
0.7346 |
| UII34295.1 | GT4 | 1 | 408 | 9 | 422 | 0.5495 |
0.7283 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P71238-F1-model_v4 | 1 | 406 | 1 | 405 | 0.9755 |
0.9843 |
| AF-O32270-F1-model_v4 | 1 | 408 | 1 | 484 | 0.6503 |
0.7251 |
| AF-Q00474-F1-model_v4 | 26 | 404 | 1 | 393 | 0.6322 |
0.6936 |