PROTEIN: Rep_863_c_42_56
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Protein File & Metadata
Source:
Rep_863_c_42_56.pdb
Genome ID:
Protein ID:
Rep_863_c_42_56
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Protein Sequence
MELLQHLLSA DASAPRLSVY NEADGTRMDF SAQTLENWTS KIANMLLEEL DLEPGTDSRI 60 LIDLPVSWQA AVIALGALAA GIPFDMTDGA AAAEPTPDDI AVVFTSPEAY LEANAGSAST 120 PLVDTVLVTQ DPFGRGVVES GGELPLGTID FGPTVRFYGD HFYGSTTPLP ELFPTDLGAE 180 RVLSQGWTDT TSFQQAILKP LAAGGSAVIV AGLCSADRLE EIAANEKVTV RA 232
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-K0F6J7-F1-model_v4 | 1 | 232 | 15 | 243 | 0.7991 |
0.8461 |
| AF-P96873-F1-model_v4 | 7 | 232 | 1 | 229 | 0.7989 |
0.8316 |
| AF-X8FFS4-F1-model_v4 | 2 | 232 | 1 | 251 | 0.7208 |
0.8063 |
| AF-X8FLT9-F1-model_v4 | 7 | 204 | 1 | 198 | 0.7149 |
0.7992 |
| AF-A0A044USL0-F1-model_v4 | 1 | 232 | 7 | 302 | 0.7063 |
0.8351 |
| AF-A0A3P7DMM3-F1-model_v4 | 1 | 232 | 7 | 301 | 0.6988 |
0.8371 |
| AF-B7EBJ6-F1-model_v4 | 1 | 232 | 11 | 267 | 0.6963 |
0.7874 |
| AF-X8FIP0-F1-model_v4 | 2 | 232 | 1 | 239 | 0.6187 |
0.7578 |
| AF-A0A1D6QAL5-F1-model_v4 | 1 | 232 | 14 | 269 | 0.6156 |
0.8131 |
| AF-P31552-F1-model_v4 | 1 | 232 | 10 | 267 | 0.5991 |
0.8361 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A8S2AZU5 | GH1 | 1 | 232 | 650 | 934 | 0.4994 |
0.8507 |
| A0A2U9BQT5 | GT25 | 1 | 232 | 80 | 338 | 0.4712 |
0.8207 |
| A0A2U9C9T3 | GT29 | 1 | 232 | 475 | 745 | 0.4459 |
0.8044 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A8S2AZU5 | GH1 | 1 | 232 | 650 | 934 | 0.4994 |
0.8507 |
| A0A2U9BQT5 | GT25 | 1 | 232 | 80 | 338 | 0.4712 |
0.8207 |
| A0A2U9C9T3 | GT29 | 1 | 232 | 475 | 745 | 0.4459 |
0.8044 |
| A0A8S2B2W4 | GT106 | 1 | 232 | 1548 | 1805 | 0.3978 |
0.7503 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 8gym-assembly1.cif.gz_t2 | 2 | 232 | 1 | 265 | 0.7156 |
0.803 |
| 8g0u-assembly1.cif.gz_C | 1 | 232 | 59 | 328 | 0.6287 |
0.8426 |
| 8v5g-assembly1.cif.gz_C | 1 | 232 | 67 | 336 | 0.6174 |
0.8434 |
| 3t5c-assembly2.cif.gz_B | 1 | 232 | 5 | 245 | 0.6122 |
0.7803 |
| 5zrn-assembly1.cif.gz_A | 1 | 232 | 5 | 249 | 0.6111 |
0.7825 |
| 7knp-assembly1.cif.gz_C | 1 | 232 | 80 | 351 | 0.6069 |
0.8438 |
| 7kdn-assembly3.cif.gz_C | 1 | 232 | 83 | 356 | 0.6052 |
0.8446 |
| 8v4p-assembly1.cif.gz_C | 1 | 232 | 89 | 360 | 0.6044 |
0.846 |
| 5vpv-assembly3.cif.gz_C | 1 | 232 | 81 | 356 | 0.6034 |
0.8431 |
| 5u95-assembly1.cif.gz_A | 1 | 232 | 21 | 266 | 0.602 |
0.789 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q93LL2-F1-model_v4 | 1 | 232 | 18 | 293 | 0.6988 |
0.8422 |
| AF-P33585-F1-model_v4 | 1 | 232 | 27 | 281 | 0.6803 |
0.7917 |
| AF-Q0TLV2-F1-model_v4 | 1 | 232 | 10 | 267 | 0.6016 |
0.8394 |
| AF-Q0T8F7-F1-model_v4 | 1 | 232 | 10 | 267 | 0.6015 |
0.8359 |
| AF-C0Q4L3-F1-model_v4 | 1 | 232 | 10 | 267 | 0.6008 |
0.8384 |
| AF-B5R1R0-F1-model_v4 | 1 | 232 | 10 | 267 | 0.6003 |
0.8378 |
| AF-B5F750-F1-model_v4 | 1 | 232 | 10 | 267 | 0.6002 |
0.8376 |
| AF-B4T6J6-F1-model_v4 | 1 | 232 | 10 | 267 | 0.5994 |
0.8366 |
| AF-Q8FLA5-F1-model_v4 | 1 | 232 | 10 | 267 | 0.5994 |
0.8364 |
| AF-Q57TJ0-F1-model_v4 | 1 | 232 | 10 | 267 | 0.5994 |
0.8365 |