PROTEIN: Rep_850_c_4_30
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Protein File & Metadata
Source:
Rep_850_c_4_30.pdb
Genome ID:
Protein ID:
Rep_850_c_4_30
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Protein Sequence
MNPFNPGFGK KPEIFLDRQF LVQKVTDELE NPNSPYRTSL IYGLRGSGKT AFLTDASTAV 60 AAKKGWIVLN LAMSDSILPN LIVELYRKAN NPLQKLFSQI KGVNISAFGV DFSIGSSQPS 120 LTSYQTLFAD MLDKLRSRGL DLFITIDEID NTPAIKEFAS LYQLMLRENY SLALMMTGLP 180 HKISELQNDK ILTFLLRSSR INLEPIALTS IKYSYQKSFR DAGFTVEDAA LTTMARMTAG 240 YAYAFQLLGY QIWNRAAQGA PVTPGLLEQE VPEFKMQLFH NVYTKVFQEL SPKDREFLLA 300 MAQCVNDASA VPRVPTNTGI ANVRISDISG RMGKGPNYIS MYRRRLLDSQ IIQATGHGTV 360 SFTLPFMSDF IIENHELYAG D 381
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-K0FEY7-F1-model_v4 | 1 | 374 | 5 | 393 | 0.6947 |
0.7397 |
| AF-Q57881-F1-model_v4 | 3 | 375 | 5 | 361 | 0.6583 |
0.7059 |
| AF-Q60285-F1-model_v4 | 10 | 379 | 2 | 342 | 0.657 |
0.7163 |
| AF-Q60380-F1-model_v4 | 13 | 375 | 1 | 358 | 0.6558 |
0.6985 |
| AF-Q58412-F1-model_v4 | 8 | 376 | 13 | 359 | 0.6542 |
0.7161 |
| AF-Q60277-F1-model_v4 | 12 | 375 | 1 | 365 | 0.6516 |
0.6901 |
| AF-Q58416-F1-model_v4 | 2 | 375 | 1 | 377 | 0.6509 |
0.6817 |
| AF-Q58049-F1-model_v4 | 13 | 375 | 1 | 363 | 0.6459 |
0.6842 |
| AF-Q59004-F1-model_v4 | 3 | 375 | 1 | 374 | 0.6406 |
0.6713 |
| AF-Q58211-F1-model_v4 | 13 | 375 | 1 | 379 | 0.6375 |
0.6876 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A975GI02 | GT51 | 1 | 381 | 5 | 371 | 0.5229 |
0.8287 |
| A0A160T7B5 | GH39 | 1 | 381 | 1259 | 1641 | 0.4892 |
0.8006 |
| UPT42567.1 | GT4 | 1 | 361 | 6 | 431 | 0.4642 |
0.7368 |
| AF-A0A0H3D656-F1-model_v4 | GT4 | 9 | 381 | 88 | 421 | 0.4605 |
0.7881 |
| WDI32101.1 | GT2 | 1 | 356 | 10 | 283 | 0.4604 |
0.8154 |
| A0A9R0NYF2 | GT4 | 9 | 381 | 88 | 420 | 0.4583 |
0.7862 |
| AF-A0A143PL75-F1-model_v4 | GH19 | 1 | 381 | 8 | 429 | 0.4356 |
0.6125 |
| A0A8S1ZBZ5 | GT1 | 1 | 357 | 115 | 866 | 0.4165 |
0.6398 |
| AF-A0A170PH88-F1-model_v4 | GT4 | 1 | 358 | 196 | 1104 | 0.4072 |
0.6441 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A975GI02 | GT51 | 1 | 381 | 5 | 371 | 0.5229 |
0.8287 |
| A0A160T7B5 | GH39 | 1 | 381 | 1259 | 1641 | 0.4892 |
0.8006 |
| UPT42567.1 | GT4 | 1 | 361 | 6 | 431 | 0.4642 |
0.7368 |
| WDI32101.1 | GT2 | 1 | 356 | 10 | 283 | 0.4604 |
0.8154 |
| A0A9R0NYF2 | GT4 | 9 | 381 | 88 | 420 | 0.4583 |
0.7862 |
| QXU42800.1 | GT4 | 1 | 381 | 269 | 759 | 0.4555 |
0.6748 |
| A0A143PL75 | GH19 | 1 | 381 | 8 | 429 | 0.4356 |
0.6125 |
| A0A8S1ZBZ5 | GT1 | 1 | 357 | 115 | 866 | 0.4165 |
0.6398 |
| A0A170PH88 | GT4 | 1 | 358 | 196 | 1104 | 0.4072 |
0.6441 |
| Q5AXQ5 | GH78 , GH79 | 8 | 381 | 1385 | 1760 | 0.3751 |
0.6613 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 2qen-assembly1.cif.gz_A | 2 | 373 | 1 | 350 | 0.7294 |
0.7808 |
| 1w5s-assembly1.cif.gz_A | 1 | 377 | 3 | 390 | 0.6044 |
0.6423 |
| 3pfi-assembly1.cif.gz_B | 11 | 361 | 2 | 276 | 0.5768 |
0.6978 |
| 2qby-assembly1.cif.gz_A | 1 | 380 | 3 | 362 | 0.5762 |
0.6208 |
| 2qby-assembly1.cif.gz_B | 1 | 378 | 2 | 354 | 0.5695 |
0.62 |
| 7p6x-assembly1.cif.gz_F | 13 | 381 | 2 | 286 | 0.568 |
0.6739 |
| 3pfi-assembly1.cif.gz_A | 3 | 372 | 1 | 300 | 0.5671 |
0.6551 |
| 1fnn-assembly2.cif.gz_B | 1 | 366 | 4 | 360 | 0.5598 |
0.6138 |
| 1in8-assembly1.cif.gz_A | 2 | 372 | 1 | 290 | 0.5535 |
0.6548 |
| 1in7-assembly1.cif.gz_A | 2 | 372 | 1 | 293 | 0.5532 |
0.6489 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q58211-F1-model_v4 | 13 | 375 | 1 | 379 | 0.6375 |
0.6876 |
| AF-P29569-F1-model_v4 | 1 | 378 | 10 | 355 | 0.5593 |
0.6198 |
| AF-Q67Q97-F1-model_v4 | 5 | 362 | 11 | 346 | 0.5456 |
0.6082 |
| AF-Q5FQC4-F1-model_v4 | 5 | 358 | 12 | 348 | 0.5456 |
0.6089 |
| AF-Q98F76-F1-model_v4 | 5 | 340 | 12 | 345 | 0.5447 |
0.609 |
| AF-B2UPI9-F1-model_v4 | 6 | 338 | 9 | 339 | 0.5419 |
0.6058 |
| AF-Q97GT1-F1-model_v4 | 5 | 363 | 10 | 345 | 0.5419 |
0.6069 |
| AF-C1A611-F1-model_v4 | 5 | 358 | 13 | 342 | 0.5418 |
0.6088 |
| AF-Q7M879-F1-model_v4 | 5 | 336 | 12 | 335 | 0.54 |
0.6118 |
| AF-Q1GYS6-F1-model_v4 | 5 | 338 | 12 | 343 | 0.5396 |
0.6065 |