PROTEIN: Rep_729_c_43_12
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Protein File & Metadata
Source:
Rep_729_c_43_12.pdb
Genome ID:
Protein ID:
Rep_729_c_43_12
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Protein Sequence
MQSLIHTLSS QPFFSTAWFG ILAMVIVGSS WCLIGLVMGD APKRGIEPSL VQLFGNSFSV 60 AASIVIMFAT GSVPECSWWI TFATCGAYVV AGMMNFFMLQ IMAYAMQRGP NGIIWAIIQS 120 ALIFPFLGGV IFFGVELTFA RTVGILLLLA ALILFGAAKE NSNARGNWRL PAFICLAICA 180 VQQNIQTAPS YYEEARAVGS IVRSLSAAGG GLVGAIFYNL ARLNAERKEQ FRRNIFNPIL 240 WKYIGALQFF NLLFAYTLFY PGMNAMADAG LGGMCYPMMV GSCIISFTLS SIWILKEKLR 300 PLQAAALGIC VSGLVLLCIP LR 322
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9HYN8-F1-model_v4 | 11 | 322 | 1 | 291 | 0.8262 |
0.8902 |
| AF-A0A0H3GXI1-F1-model_v4 | 12 | 322 | 1 | 284 | 0.8191 |
0.8897 |
| AF-K0EUT1-F1-model_v4 | 11 | 322 | 3 | 302 | 0.8167 |
0.8715 |
| AF-A0A0H3GK88-F1-model_v4 | 12 | 322 | 1 | 292 | 0.8137 |
0.8759 |
| AF-Q5F951-F1-model_v4 | 21 | 322 | 1 | 284 | 0.8123 |
0.8922 |
| AF-Q9I0R0-F1-model_v4 | 12 | 322 | 1 | 288 | 0.8122 |
0.8921 |
| AF-K0F565-F1-model_v4 | 18 | 320 | 1 | 287 | 0.8097 |
0.8741 |
| AF-Q8DPI5-F1-model_v4 | 9 | 320 | 3 | 296 | 0.8076 |
0.8691 |
| AF-K0F3J5-F1-model_v4 | 11 | 322 | 7 | 293 | 0.8059 |
0.8834 |
| AF-P0ABT8-F1-model_v4 | 12 | 322 | 3 | 293 | 0.8053 |
0.88 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| WJH36882.1 | GH36 | 6 | 322 | 323 | 668 | 0.5798 |
0.8077 |
| AF-A0A3P6AF83-F1-model_v4 | GH28 | 1 | 322 | 24 | 771 | 0.546 |
0.7821 |
| AF-A0A7H8KSK8-F1-model_v4 | GT51 | 11 | 322 | 812 | 1113 | 0.5054 |
0.8384 |
| AF-A0A4D6KI88-F1-model_v4 | GH1 | 6 | 322 | 86 | 395 | 0.4766 |
0.7426 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| WJH36882.1 | GH36 | 6 | 322 | 323 | 668 | 0.5798 |
0.8077 |
| A0A3P6AF83 | GH28 | 1 | 322 | 24 | 771 | 0.546 |
0.7821 |
| A0A7H8KSK8 | GT51 | 11 | 322 | 812 | 1113 | 0.5054 |
0.8384 |
| A0A4D6KI88 | GH1 | 6 | 322 | 86 | 395 | 0.4766 |
0.7426 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5i20-assembly4.cif.gz_D | 15 | 321 | 1 | 280 | 0.8021 |
0.8792 |
| 5i20-assembly1.cif.gz_A | 15 | 322 | 1 | 284 | 0.7966 |
0.872 |
| 7paf-assembly1.cif.gz_D | 19 | 318 | 1 | 278 | 0.7966 |
0.8743 |
| 5i20-assembly3.cif.gz_C | 15 | 322 | 1 | 280 | 0.7939 |
0.8736 |
| 5i20-assembly2.cif.gz_B | 15 | 322 | 1 | 279 | 0.792 |
0.8702 |
| 5i20-assembly5.cif.gz_E | 15 | 322 | 1 | 286 | 0.7905 |
0.8657 |
| 5ogk-assembly2.cif.gz_C | 9 | 322 | 1 | 292 | 0.7817 |
0.8468 |
| 5oge-assembly3.cif.gz_H-2 | 8 | 322 | 1 | 297 | 0.7813 |
0.8413 |
| 5oge-assembly2.cif.gz_B | 10 | 322 | 1 | 297 | 0.7805 |
0.8404 |
| 6qsk-assembly2.cif.gz_G-2 | 9 | 322 | 1 | 294 | 0.7772 |
0.8401 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q08794-F1-model_v4 | 12 | 322 | 1 | 300 | 0.8204 |
0.8859 |
| AF-O34416-F1-model_v4 | 16 | 322 | 1 | 288 | 0.8182 |
0.8893 |
| AF-O29740-F1-model_v4 | 16 | 322 | 1 | 288 | 0.8154 |
0.8822 |
| AF-P39649-F1-model_v4 | 13 | 322 | 1 | 286 | 0.8073 |
0.8893 |
| AF-P71356-F1-model_v4 | 8 | 322 | 1 | 301 | 0.806 |
0.8602 |
| AF-P0ABT8-F1-model_v4 | 12 | 322 | 3 | 293 | 0.8053 |
0.88 |
| AF-D5RAW5-F1-model_v4 | 13 | 321 | 1 | 299 | 0.8051 |
0.8576 |
| AF-O31448-F1-model_v4 | 11 | 322 | 1 | 294 | 0.8035 |
0.8776 |
| AF-P44170-F1-model_v4 | 21 | 322 | 1 | 291 | 0.8014 |
0.8624 |
| AF-P0ABT9-F1-model_v4 | 12 | 322 | 3 | 294 | 0.8008 |
0.8723 |