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PROTEIN: Rep_725_c_29_16

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Protein File & Metadata
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Source:
Rep_725_c_29_16.pdb
Genome ID:
Rep_725
Protein ID:
Rep_725_c_29_16

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Detailed structural information will appear here after analysis...

Protein Sequence 
MSRLTIHAAL   FTGGMLLVSA   LSSCSRFYAL   SPGGSDTPRS   LAARMEKHTE   VMQKTIGSRN 60
ARKPKSMEAA   ARYIAGNFSD   MGYAVTLQPV   AGGDAKKGTA   IYNVLVYKPG   LYSNNQSIVV 120
GANYDSSERL   NNGSGAALLL   ETARNLKDIP   TNHNIYFVAY   ANGAEPAGKS   ADSGAYVHAK 180
TLSASIGAGN   ILGMINLEPQ   ELGSDGEKKR   PEPASPQEAV   LFMTTSRGKE   FADQCAAPFT 240
KSWEQAPPTF   HREPSAIAGN   DRHYAALDIP   TVSCQCKYAI   TDSHTEDYVH   ALTDMIHQVA 300
DNDVPKPEKN   AAPEPKKP 318
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-P76482-F1-model_v4 39 302 35 323 0.6913 0.8457
AF-Q32CH7-F1-model_v4 38 303 26 345 0.6381 0.7985
AF-P10423-F1-model_v4 38 303 25 345 0.6377 0.7982
AF-Q9N516-F1-model_v4 39 304 24 355 0.636 0.8224
AF-Q8ZMF4-F1-model_v4 37 303 24 345 0.6359 0.7965
AF-A0A0N4UML8-F1-model_v4 39 303 25 326 0.632 0.7772
AF-Q04033-F1-model_v4 39 306 94 374 0.6316 0.8149
AF-G4VD11-F1-model_v4 39 303 47 336 0.6246 0.7795
AF-Q9VRQ9-F1-model_v4 39 312 35 340 0.6226 0.7565
AF-A0A077ZDI6-F1-model_v4 39 303 19 312 0.6208 0.7508
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A160T4H4-F1-model_v4 GH1 39 304 3 399 0.5797 0.7804
AF-A0A2H1EB84-F1-model_v4 GH114 39 317 69 531 0.5334 0.7859
AF-A0A0K3AYS4-F1-model_v4 CBM5 40 303 41 316 0.5071 0.7843
AF-A0A0N9IBZ3-F1-model_v4 CBM5 40 303 43 318 0.5049 0.7818
AF-K0K8E6-F1-model_v4 CBM5 40 303 47 322 0.5042 0.7834
A0A640SM19 CBM61 38 303 72 348 0.4987 0.7773
AF-A0A1S6HQJ8-F1-model_v4 CBM5 39 305 129 405 0.4972 0.8084
AF-A0A7H8S7E3-F1-model_v4 GH3 35 314 221 974 0.4703 0.803
AF-A0A1H1VFB0-F1-model_v4 CBM12 38 315 635 979 0.4383 0.7694
AF-A0A291Q3Z8-F1-model_v4 CBM12 30 303 526 910 0.4375 0.7783
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A160T4H4 GH1 39 304 3 399 0.5797 0.7804
A0A2H1EB84 GH114 39 317 69 531 0.5334 0.7859
UTA66659.1 CBM48 39 315 37 574 0.5217 0.7878
K0K8E6 CBM5 40 303 47 322 0.5042 0.7834
A0A640SM19 CBM61 38 303 72 348 0.4987 0.7773
A0A1S6HQJ8 CBM5 39 305 129 405 0.4972 0.8084
A0A7S7J113 CBM50 39 311 119 602 0.4888 0.8078
A0A7H8S7E3 GH3 35 314 221 974 0.4703 0.803
A0A291Q3Z8 CBM12 30 303 526 910 0.4375 0.7783
D2AUV0 CBM12 38 303 604 922 0.4172 0.7651
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
3gux-assembly2.cif.gz_B 40 302 8 246 0.7078 0.8361
3gux-assembly1.cif.gz_A 40 302 8 247 0.7042 0.8314
3b3s-assembly1.cif.gz_A 39 304 16 291 0.704 0.815
3b7i-assembly1.cif.gz_A 39 304 16 291 0.704 0.815
1amp-assembly1.cif.gz_A 39 304 16 291 0.7038 0.8149
2anp-assembly1.cif.gz_A 39 304 16 291 0.7036 0.8148
3b3t-assembly1.cif.gz_A 39 304 16 291 0.7019 0.8128
6zeq-assembly1.cif.gz_A 39 306 20 301 0.6947 0.8124
1tkj-assembly1.cif.gz_A 40 301 4 277 0.6869 0.7898
1tkf-assembly1.cif.gz_A 40 301 4 273 0.6858 0.7825
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-P76482-F1-model_v4 39 302 35 323 0.6913 0.8457
AF-Q8J2N2-F1-model_v4 11 306 7 377 0.6482 0.7644
AF-P10423-F1-model_v4 38 303 25 345 0.6377 0.7982
AF-E5A6Z0-F1-model_v4 39 315 20 407 0.6335 0.8405
AF-Q04033-F1-model_v4 39 306 94 374 0.6316 0.8149
AF-C5FLR8-F1-model_v4 21 306 12 372 0.6311 0.7637
AF-D4DF09-F1-model_v4 39 306 92 368 0.6286 0.8052
AF-D4B4V2-F1-model_v4 39 306 92 368 0.6286 0.8052
AF-Q2U1F3-F1-model_v4 39 306 96 377 0.6268 0.8115
AF-E4ZHQ5-F1-model_v4 26 306 21 388 0.6267 0.7854
Download Full SwissProt Results